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dataplatform
atlas
Commits
4c6f1d16
Commit
4c6f1d16
authored
Sep 06, 2018
by
Madhan Neethiraj
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Plain Diff
ATLAS-2827: fix to handle failure in saving indexable string property of large size - #2
parent
f31a7c63
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Showing
4 changed files
with
52 additions
and
8 deletions
+52
-8
AtlasConfiguration.java
intg/src/main/java/org/apache/atlas/AtlasConfiguration.java
+2
-0
EntityGraphMapper.java
...he/atlas/repository/store/graph/v2/EntityGraphMapper.java
+28
-8
RequestContext.java
...er-api/src/main/java/org/apache/atlas/RequestContext.java
+19
-0
NotificationHookConsumer.java
...g/apache/atlas/notification/NotificationHookConsumer.java
+3
-0
No files found.
intg/src/main/java/org/apache/atlas/AtlasConfiguration.java
View file @
4c6f1d16
...
@@ -38,6 +38,8 @@ public enum AtlasConfiguration {
...
@@ -38,6 +38,8 @@ public enum AtlasConfiguration {
NOTIFICATION_SPLIT_MESSAGE_SEGMENTS_WAIT_TIME_SECONDS
(
"atlas.notification.split.message.segments.wait.time.seconds"
,
15
*
60
),
NOTIFICATION_SPLIT_MESSAGE_SEGMENTS_WAIT_TIME_SECONDS
(
"atlas.notification.split.message.segments.wait.time.seconds"
,
15
*
60
),
NOTIFICATION_SPLIT_MESSAGE_BUFFER_PURGE_INTERVAL_SECONDS
(
"atlas.notification.split.message.buffer.purge.interval.seconds"
,
5
*
60
),
NOTIFICATION_SPLIT_MESSAGE_BUFFER_PURGE_INTERVAL_SECONDS
(
"atlas.notification.split.message.buffer.purge.interval.seconds"
,
5
*
60
),
GRAPHSTORE_INDEXED_STRING_SAFE_LENGTH
(
"atlas.graphstore.indexed.string.safe.length"
,
Short
.
MAX_VALUE
),
// based on org.apache.hadoop.hbase.client.Mutation.checkRow()
//search configuration
//search configuration
SEARCH_MAX_LIMIT
(
"atlas.search.maxlimit"
,
10000
),
SEARCH_MAX_LIMIT
(
"atlas.search.maxlimit"
,
10000
),
SEARCH_DEFAULT_LIMIT
(
"atlas.search.defaultlimit"
,
100
);
SEARCH_DEFAULT_LIMIT
(
"atlas.search.defaultlimit"
,
100
);
...
...
repository/src/main/java/org/apache/atlas/repository/store/graph/v2/EntityGraphMapper.java
View file @
4c6f1d16
...
@@ -18,6 +18,7 @@
...
@@ -18,6 +18,7 @@
package
org
.
apache
.
atlas
.
repository
.
store
.
graph
.
v2
;
package
org
.
apache
.
atlas
.
repository
.
store
.
graph
.
v2
;
import
org.apache.atlas.AtlasConfiguration
;
import
org.apache.atlas.AtlasErrorCode
;
import
org.apache.atlas.AtlasErrorCode
;
import
org.apache.atlas.RequestContext
;
import
org.apache.atlas.RequestContext
;
import
org.apache.atlas.exception.AtlasBaseException
;
import
org.apache.atlas.exception.AtlasBaseException
;
...
@@ -35,7 +36,6 @@ import org.apache.atlas.model.instance.EntityMutationResponse;
...
@@ -35,7 +36,6 @@ import org.apache.atlas.model.instance.EntityMutationResponse;
import
org.apache.atlas.model.instance.EntityMutations.EntityOperation
;
import
org.apache.atlas.model.instance.EntityMutations.EntityOperation
;
import
org.apache.atlas.model.typedef.AtlasStructDef.AtlasAttributeDef
;
import
org.apache.atlas.model.typedef.AtlasStructDef.AtlasAttributeDef
;
import
org.apache.atlas.model.typedef.AtlasStructDef.AtlasAttributeDef.Cardinality
;
import
org.apache.atlas.model.typedef.AtlasStructDef.AtlasAttributeDef.Cardinality
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.RepositoryException
;
import
org.apache.atlas.repository.RepositoryException
;
import
org.apache.atlas.repository.converters.AtlasInstanceConverter
;
import
org.apache.atlas.repository.converters.AtlasInstanceConverter
;
import
org.apache.atlas.repository.graph.GraphHelper
;
import
org.apache.atlas.repository.graph.GraphHelper
;
...
@@ -87,7 +87,8 @@ import static org.apache.atlas.type.AtlasStructType.AtlasAttribute.AtlasRelation
...
@@ -87,7 +87,8 @@ import static org.apache.atlas.type.AtlasStructType.AtlasAttribute.AtlasRelation
@Component
@Component
public
class
EntityGraphMapper
{
public
class
EntityGraphMapper
{
private
static
final
Logger
LOG
=
LoggerFactory
.
getLogger
(
EntityGraphMapper
.
class
);
private
static
final
Logger
LOG
=
LoggerFactory
.
getLogger
(
EntityGraphMapper
.
class
);
private
static
final
int
INDEXED_STR_MAX_ALLOWED_LEN
=
33482223
;
private
static
final
int
INDEXED_STR_SAFE_LEN
=
AtlasConfiguration
.
GRAPHSTORE_INDEXED_STRING_SAFE_LENGTH
.
getInt
();
private
final
GraphHelper
graphHelper
=
GraphHelper
.
getInstance
();
private
final
GraphHelper
graphHelper
=
GraphHelper
.
getInstance
();
private
final
AtlasGraph
graph
;
private
final
AtlasGraph
graph
;
...
@@ -619,13 +620,32 @@ public class EntityGraphMapper {
...
@@ -619,13 +620,32 @@ public class EntityGraphMapper {
// Janus bug, when an indexed string attribute has a value longer than a certain length then the reverse indexed key generated by JanusGraph
// Janus bug, when an indexed string attribute has a value longer than a certain length then the reverse indexed key generated by JanusGraph
// exceeds the HBase row length's hard limit (Short.MAX). This trimming and hashing procedure is to circumvent that limitation
// exceeds the HBase row length's hard limit (Short.MAX). This trimming and hashing procedure is to circumvent that limitation
if
(
ret
!=
null
&&
isIndexableStrAttr
)
{
if
(
ret
!=
null
&&
isIndexableStrAttr
)
{
String
value
=
(
String
)
ctx
.
getValue
();
String
value
=
ret
.
toString
();
if
(
value
.
length
()
>
INDEXED_STR_SAFE_LEN
)
{
RequestContext
requestContext
=
RequestContext
.
get
();
if
(
value
.
length
()
>
INDEXED_STR_MAX_ALLOWED_LEN
)
{
final
int
trimmedLength
;
LOG
.
warn
(
"Indexed-String-Attribute: {} exceeds {} characters, trimming and appending checksum"
,
ctx
.
getAttribute
().
getQualifiedName
(),
INDEXED_STR_MAX_ALLOWED_LEN
);
if
(
requestContext
.
getAttemptCount
()
<=
1
)
{
// if this is the first attempt, try saving as it is; trim on retry
String
sha256Hex
=
DigestUtils
.
shaHex
(
value
);
// Storing SHA checksum in case verification is needed after retrieval
trimmedLength
=
value
.
length
();
ret
=
value
.
substring
(
0
,
(
INDEXED_STR_MAX_ALLOWED_LEN
-
1
)
-
sha256Hex
.
length
())
+
":"
+
sha256Hex
;
}
else
if
(
requestContext
.
getAttemptCount
()
>=
requestContext
.
getMaxAttempts
())
{
// if this is the last attempt, set to 'safe_len'
trimmedLength
=
INDEXED_STR_SAFE_LEN
;
}
else
if
(
requestContext
.
getAttemptCount
()
==
2
)
{
// based on experimentation, string length of 4 times 'safe_len' succeeds
trimmedLength
=
Math
.
min
(
4
*
INDEXED_STR_SAFE_LEN
,
value
.
length
());
}
else
if
(
requestContext
.
getAttemptCount
()
==
3
)
{
// if length of 4 times 'safe_len' failed, try twice 'safe_len'
trimmedLength
=
Math
.
min
(
2
*
INDEXED_STR_SAFE_LEN
,
value
.
length
());
}
else
{
// if twice the 'safe_len' failed, trim to 'safe_len'
trimmedLength
=
INDEXED_STR_SAFE_LEN
;
}
if
(
trimmedLength
<
value
.
length
())
{
LOG
.
warn
(
"Indexed-String-Attribute: {} length is {} characters, trimming to {}"
,
ctx
.
getAttribute
().
getQualifiedName
(),
value
.
length
(),
trimmedLength
);
String
checksumSuffix
=
":"
+
DigestUtils
.
shaHex
(
value
);
// Storing SHA checksum in case verification is needed after retrieval
ret
=
value
.
substring
(
0
,
trimmedLength
-
checksumSuffix
.
length
())
+
checksumSuffix
;
}
}
}
}
}
...
...
server-api/src/main/java/org/apache/atlas/RequestContext.java
View file @
4c6f1d16
...
@@ -42,6 +42,8 @@ public class RequestContext {
...
@@ -42,6 +42,8 @@ public class RequestContext {
private
String
user
;
private
String
user
;
private
Set
<
String
>
userGroups
;
private
Set
<
String
>
userGroups
;
private
String
clientIPAddress
;
private
String
clientIPAddress
;
private
int
maxAttempts
=
1
;
private
int
attemptCount
=
1
;
private
RequestContext
()
{
private
RequestContext
()
{
...
@@ -95,6 +97,23 @@ public class RequestContext {
...
@@ -95,6 +97,23 @@ public class RequestContext {
this
.
clientIPAddress
=
clientIPAddress
;
this
.
clientIPAddress
=
clientIPAddress
;
}
}
public
int
getMaxAttempts
()
{
return
maxAttempts
;
}
public
void
setMaxAttempts
(
int
maxAttempts
)
{
this
.
maxAttempts
=
maxAttempts
;
}
public
int
getAttemptCount
()
{
return
attemptCount
;
}
public
void
setAttemptCount
(
int
attemptCount
)
{
this
.
attemptCount
=
attemptCount
;
}
public
void
recordEntityUpdate
(
AtlasObjectId
entity
)
{
public
void
recordEntityUpdate
(
AtlasObjectId
entity
)
{
if
(
entity
!=
null
&&
entity
.
getGuid
()
!=
null
)
{
if
(
entity
!=
null
&&
entity
.
getGuid
()
!=
null
)
{
updatedEntities
.
put
(
entity
.
getGuid
(),
entity
);
updatedEntities
.
put
(
entity
.
getGuid
(),
entity
);
...
...
webapp/src/main/java/org/apache/atlas/notification/NotificationHookConsumer.java
View file @
4c6f1d16
...
@@ -376,6 +376,9 @@ public class NotificationHookConsumer implements Service, ActiveStateChangeHandl
...
@@ -376,6 +376,9 @@ public class NotificationHookConsumer implements Service, ActiveStateChangeHandl
try
{
try
{
RequestContext
requestContext
=
RequestContext
.
get
();
RequestContext
requestContext
=
RequestContext
.
get
();
requestContext
.
setAttemptCount
(
numRetries
+
1
);
requestContext
.
setMaxAttempts
(
maxRetries
);
requestContext
.
setUser
(
messageUser
,
null
);
requestContext
.
setUser
(
messageUser
,
null
);
switch
(
message
.
getType
())
{
switch
(
message
.
getType
())
{
...
...
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