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Commit 6fd04d9a by Neeru Gupta Committed by Jeff Hagelberg
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ATLAS-695: Add Titan 1 project to Atlas

Signed-off-by: 's avatarJeff Hagelberg <jnhagelberg@us.ibm.com>
parent 46b1b36e
Showing with 4673 additions and 102 deletions
catalog/pom.xml
......@@ -30,23 +30,28 @@
<description>Apache Atlas Business Catalog Module</description>
<name>Apache Atlas Business Catalog</name>
<packaging>jar</packaging>
<properties>
<tinkerpop.version>2.6.0</tinkerpop.version>
<titan.version>0.5.4</titan.version>
<lucene.version>4.8.1</lucene.version>
</properties>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-repository</artifactId>
</dependency>
<profiles>
<profile>
<id>titan1</id>
<activation>
<activeByDefault>false</activeByDefault>
</activation>
<properties>
<lucene.version>4.10.4</lucene.version>
</properties>
</profile>
</profiles>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-repository</artifactId>
<classifier>tests</classifier>
<scope>test</scope>
</dependency>
<dependency>
......@@ -64,11 +69,43 @@
<artifactId>atlas-graphdb-api</artifactId>
</dependency>
<!-- for now, catalog can only be used with Titan 0.5.4 -->
<!-- for now, keep the titan 0.5.4 / TP 2 dependencies. This will need to be changed to use a
more generic query framework that supports both TP2/TP3. Maybe the DSL translation could be changed to use
that as well...
-->
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-titan0</artifactId>
<version>${project.version}</version>
<groupId>com.tinkerpop.blueprints</groupId>
<artifactId>blueprints-core</artifactId>
<version>${tinkerpop.version}</version>
</dependency>
<dependency>
<groupId>com.tinkerpop.gremlin</groupId>
<artifactId>gremlin-java</artifactId>
<version>${tinkerpop.version}</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-core</artifactId>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-core</artifactId>
<version>${lucene.version}</version>
</dependency>
<dependency>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-queryparser</artifactId>
<version>${lucene.version}</version>
</dependency>
<dependency>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-analyzers-common</artifactId>
<version>${lucene.version}</version>
</dependency>
<dependency>
......@@ -96,18 +133,6 @@
<artifactId>json-simple</artifactId>
</dependency>
<dependency>
<groupId>com.tinkerpop.blueprints</groupId>
<artifactId>blueprints-core</artifactId>
<version>${tinkerpop.version}</version>
</dependency>
<dependency>
<groupId>com.tinkerpop.gremlin</groupId>
<artifactId>gremlin-java</artifactId>
<version>${tinkerpop.version}</version>
</dependency>
<!-- testing -->
<dependency>
<groupId>org.easymock</groupId>
......
catalog/src/main/java/org/apache/atlas/catalog/query/BaseQuery.java
......@@ -30,10 +30,10 @@ import org.apache.atlas.catalog.exception.ResourceNotFoundException;
import org.apache.atlas.catalog.projection.Projection;
import org.apache.atlas.catalog.projection.ProjectionResult;
import org.apache.atlas.repository.Constants;
import org.apache.atlas.repository.graphdb.titan0.Titan0GraphDatabase;
import org.apache.atlas.repository.graph.AtlasGraphProvider;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.typesystem.persistence.Id;
import com.thinkaurelius.titan.core.TitanGraph;
import com.tinkerpop.blueprints.Compare;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.gremlin.java.GremlinPipeline;
......@@ -165,10 +165,9 @@ public abstract class BaseQuery implements AtlasQuery {
return request;
}
//todo: abstract
// Underlying method is synchronized and caches the graph in a static field
protected TitanGraph getGraph() {
return Titan0GraphDatabase.getGraphInstance();
protected AtlasGraph getGraph() {
return AtlasGraphProvider.getGraphInstance();
}
protected VertexWrapper wrapVertex(Vertex v) {
......
catalog/src/test/java/org/apache/atlas/catalog/query/AtlasEntityQueryTest.java
......@@ -22,10 +22,12 @@ import com.thinkaurelius.titan.core.TitanGraph;
import com.tinkerpop.blueprints.Vertex;
import com.tinkerpop.gremlin.java.GremlinPipeline;
import com.tinkerpop.pipes.Pipe;
import org.apache.atlas.catalog.Request;
import org.apache.atlas.catalog.VertexWrapper;
import org.apache.atlas.catalog.definition.ResourceDefinition;
import org.apache.atlas.repository.Constants;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.easymock.Capture;
import org.testng.annotations.Test;
......@@ -44,7 +46,7 @@ public class AtlasEntityQueryTest {
//todo: add tests for instance query and getInitialPipeline()
@Test
public void testExecute_Collection() throws Exception {
TitanGraph graph = createStrictMock(TitanGraph.class);
AtlasGraph graph = createStrictMock(AtlasGraph.class);
QueryExpression expression = createStrictMock(QueryExpression.class);
ResourceDefinition resourceDefinition = createStrictMock(ResourceDefinition.class);
Request request = createStrictMock(Request.class);
......@@ -107,7 +109,7 @@ public class AtlasEntityQueryTest {
@Test
public void testExecute_Collection_rollbackOnException() throws Exception {
TitanGraph graph = createStrictMock(TitanGraph.class);
AtlasGraph graph = createStrictMock(AtlasGraph.class);
QueryExpression expression = createStrictMock(QueryExpression.class);
ResourceDefinition resourceDefinition = createStrictMock(ResourceDefinition.class);
Request request = createStrictMock(Request.class);
......@@ -151,7 +153,7 @@ public class AtlasEntityQueryTest {
@Test
public void testExecute_Collection_update() throws Exception {
TitanGraph graph = createStrictMock(TitanGraph.class);
AtlasGraph graph = createStrictMock(AtlasGraph.class);
QueryExpression expression = createStrictMock(QueryExpression.class);
ResourceDefinition resourceDefinition = createStrictMock(ResourceDefinition.class);
Request request = createStrictMock(Request.class);
......@@ -227,7 +229,7 @@ public class AtlasEntityQueryTest {
private final GremlinPipeline initialPipeline;
private final Pipe queryPipe;
private final Pipe notDeletedPipe;
private final TitanGraph graph;
private final AtlasGraph graph;
private final VertexWrapper vWrapper;
public TestAtlasEntityQuery(QueryExpression queryExpression,
......@@ -236,7 +238,7 @@ public class AtlasEntityQueryTest {
GremlinPipeline initialPipeline,
Pipe queryPipe,
Pipe notDeletedPipe,
TitanGraph graph,
AtlasGraph graph,
VertexWrapper vWrapper) {
super(queryExpression, resourceDefinition, request);
......@@ -263,7 +265,7 @@ public class AtlasEntityQueryTest {
}
@Override
protected TitanGraph getGraph() {
protected AtlasGraph getGraph() {
return graph;
}
......
graphdb/titan0/src/main/java/org/apache/atlas/utils/IteratorToIterableAdapter.java → graphdb/common/src/main/java/org/apache/atlas/repository/graphdb/utils/IteratorToIterableAdapter.java
......@@ -16,7 +16,7 @@
* limitations under the License.
*/
package org.apache.atlas.utils;
package org.apache.atlas.repository.graphdb.utils;
import java.util.Iterator;
......
graphdb/graphdb-impls/pom.xml
......@@ -37,21 +37,16 @@
<description>Apache Atlas Graph Database Implementation Dependencies</description>
<name>Apache Atlas Graph Database Implementation Dependencies</name>
<packaging>pom</packaging>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-titan1</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-titan0</artifactId>
<version>${project.version}</version>
</dependency>
<!-- Additional dependencies should be added here
as more implementations are introduced. In the
profile corresponding to the implementation in
the root pom.xml, all dependencies except for
that one should be excluded. -->
</dependencies>
</project>
graphdb/pom.xml
......@@ -19,6 +19,7 @@
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<artifactId>apache-atlas</artifactId>
<groupId>org.apache.atlas</groupId>
......@@ -32,8 +33,9 @@
<modules>
<module>api</module>
<module>titan0</module>
<module>common</module>
<module>graphdb-impls</module>
<module>titan0</module>
<module>titan1</module>
</modules>
</project>
graphdb/titan0/pom.xml
......@@ -34,9 +34,31 @@
<properties>
<tinkerpop.version>2.6.0</tinkerpop.version>
<titan.version>0.5.4</titan.version>
<checkstyle.failOnViolation>false</checkstyle.failOnViolation>
<guava.version>14.0</guava.version>
</properties>
<profiles>
<profile>
<id>titan0</id>
<activation>
<activeByDefault>true</activeByDefault>
</activation>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.18.1</version>
<configuration>
<skip>false</skip>
</configuration>
</plugin>
</plugins>
</build>
</profile>
</profiles>
<dependencies>
<!-- for graphdb interface definitions -->
......@@ -150,7 +172,7 @@
<plugins>
<!--
Create 'uber' jar that contains all of the dependencies (except those whose scope is provided)
Only Titan 0l5l4 and its dependencies are included. The other dependencies are bundled in the war file.
Only Titan 0.5.4 and its dependencies are included. The other dependencies are bundled in the war file.
-->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
......@@ -188,7 +210,6 @@
<shadedPattern>atlas.shaded.titan.guava</shadedPattern>
</relocation>
</relocations>
<createSourcesJar>true</createSourcesJar>
<transformers>
<transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer"/>
</transformers>
......
graphdb/titan0/src/main/java/org/apache/atlas/repository/graphdb/titan0/Titan0Graph.java
......@@ -45,8 +45,8 @@ import org.apache.atlas.repository.graphdb.AtlasSchemaViolationException;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.GremlinVersion;
import org.apache.atlas.repository.graphdb.titan0.query.Titan0GraphQuery;
import org.apache.atlas.repository.graphdb.utils.IteratorToIterableAdapter;
import org.apache.atlas.typesystem.types.IDataType;
import org.apache.atlas.utils.IteratorToIterableAdapter;
import com.google.common.base.Function;
import com.google.common.collect.Iterables;
......
graphdb/titan1/pom.xml 0 → 100644
<?xml version="1.0" encoding="UTF-8"?>
<!--
~ Licensed to the Apache Software Foundation (ASF) under one
~ or more contributor license agreements. See the NOTICE file
~ distributed with this work for additional information
~ regarding copyright ownership. The ASF licenses this file
~ to you under the Apache License, Version 2.0 (the
~ "License"); you may not use this file except in compliance
~ with the License. You may obtain a copy of the License at
~
~ http://www.apache.org/licenses/LICENSE-2.0
~
~ Unless required by applicable law or agreed to in writing, software
~ distributed under the License is distributed on an "AS IS" BASIS,
~ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
~ See the License for the specific language governing permissions and
~ limitations under the License.
-->
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<artifactId>atlas-graphdb</artifactId>
<groupId>org.apache.atlas</groupId>
<version>0.8-incubating-SNAPSHOT</version>
</parent>
<artifactId>atlas-graphdb-titan1</artifactId>
<description>Apache Atlas Titan 1.0.0 Graph DB Impl</description>
<name>Apache Atlas Titan 1.0.0 GraphDB Impl</name>
<packaging>jar</packaging>
<properties>
<tinkerpop.version>3.0.1-incubating</tinkerpop.version>
<titan.version>1.0.0</titan.version>
<checkstyle.failOnViolation>false</checkstyle.failOnViolation>
</properties>
<profiles>
<profile>
<id>titan1</id>
<activation>
<jdk>1.8</jdk>
</activation>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-enforcer-plugin</artifactId>
<version>1.4.1</version>
<executions>
<execution>
<id>enforce-java-8</id>
<goals>
<goal>enforce</goal>
</goals>
<configuration>
<rules>
<requireJavaVersion>
<version>1.8.0</version>
</requireJavaVersion>
<requireMavenVersion>
<version>3.1.0</version>
</requireMavenVersion>
</rules>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.18.1</version>
<configuration>
<skip>false</skip>
</configuration>
</plugin>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<skipMain>false</skipMain>
<skip>false</skip>
<excludes>
<exclude>org.apache.atlas</exclude>
</excludes>
</configuration>
</plugin>
</plugins>
</build>
<properties>
<graphdb.backend.impl>org.apache.atlas.repository.graphdb.titan1.Titan1GraphDatabase</graphdb.backend.impl>
</properties>
</profile>
</profiles>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-common</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-api</artifactId>
<!-- set scope to provided to prevent the this from being included in the shared jar -->
<scope>provided</scope>
</dependency>
<dependency>
<groupId>com.google.inject</groupId>
<artifactId>guice</artifactId>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>commons-configuration</groupId>
<artifactId>commons-configuration</artifactId>
<scope>provided</scope>
</dependency>
<!-- https://mvnrepository.com/artifact/com.thinkaurelius.titan/titan-hbase -->
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-hbase</artifactId>
<version>${titan.version}</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-core</artifactId>
<version>${titan.version}</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-solr</artifactId>
<version>${titan.version}</version>
<!-- this conflicts with the servlet api version that Atlas needs -->
<exclusions>
<exclusion>
<groupId>javax.servlet</groupId>
<artifactId>servlet-api</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.apache.hbase</groupId>
<artifactId>hbase-client</artifactId>
</dependency>
<dependency>
<groupId>com.vividsolutions</groupId>
<artifactId>jts</artifactId>
</dependency>
<dependency>
<groupId>org.apache.solr</groupId>
<artifactId>solr-core</artifactId>
</dependency>
<dependency>
<groupId>org.apache.solr</groupId>
<artifactId>solr-solrj</artifactId>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-es</artifactId>
<version>${titan.version}</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-berkeleyje</artifactId>
<version>${titan.version}</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-lucene</artifactId>
<version>${titan.version}</version>
</dependency>
<dependency>
<groupId>org.testng</groupId>
<artifactId>testng</artifactId>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
</dependency>
<!-- titan 1 requires guava 18.0 -->
<dependency>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>18.0</version>
</dependency>
<!-- Graph DB -->
<dependency>
<groupId>org.apache.tinkerpop</groupId>
<artifactId>gremlin-core</artifactId>
<version>3.0.1-incubating</version>
</dependency>
<dependency>
<groupId>org.apache.tinkerpop</groupId>
<artifactId>tinkergraph-gremlin</artifactId>
<version>3.0.1-incubating</version>
</dependency>
</dependencies>
<build>
<plugins>
<!-- Skip the compilation of code and tests by default. Titan 1 code will be compiled only when titan1 profile is explicitly enabled. -->
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<skipMain>true</skipMain>
<skip>true</skip>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.18.1</version>
<configuration>
<skip>true</skip>
<skipTests>true</skipTests>
</configuration>
</plugin>
<!--
Create 'uber' jar that contains all of the dependencies (except those whose scope is provided)
Only titan 1 and its dependencies are included. The other dependencies are bundled in the war file.
We also relocate the Google guava packages to avoid conflicts with Atlas code which depends on Guava 14
-->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<version>2.4.3</version>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
<configuration>
<shadedArtifactAttached>false</shadedArtifactAttached>
<artifactSet>
<excludes>
<!-- these are bundled with Atlas -->
<exclude>org.slf4j:*</exclude>
</excludes>
</artifactSet>
<relocations>
<relocation>
<pattern>com.google.common</pattern>
<shadedPattern>org.apache.atlas.shaded.com.google.common</shadedPattern>
</relocation>
</relocations>
<!-- disable generation of sources jar due to clash with maven-source-plugin -->
<!-- <createSourcesJar>true</createSourcesJar> -->
<transformers>
<transformer implementation="org.apache.maven.plugins.shade.resource.ServicesResourceTransformer" />
</transformers>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-core</artifactId>
<version>1.0.0</version>
<exclusions>
<!-- rexster does not work with servlet-api -->
<exclusion>
<groupId>com.tinkerpop.rexster</groupId>
<artifactId>rexster-core</artifactId>
</exclusion>
<exclusion>
<groupId>com.tinkerpop.rexster</groupId>
<artifactId>rexster-server</artifactId>
</exclusion>
<!-- asm 4.0 does not work with jersey asm 3.1 -->
<exclusion>
<groupId>com.tinkerpop</groupId>
<artifactId>frames</artifactId>
</exclusion>
<exclusion>
<groupId>com.esotericsoftware.reflectasm</groupId>
<artifactId>reflectasm</artifactId>
</exclusion>
<exclusion>
<groupId>org.ow2.asm</groupId>
<artifactId>asm</artifactId>
</exclusion>
<exclusion> <!-- GPL license imported from ganglia -->
<groupId>org.acplt</groupId>
<artifactId>oncrpc</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-berkeleyje</artifactId>
<version>1.0.0</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-hbase</artifactId>
<version>1.0.0</version>
</dependency>
<dependency>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-solr</artifactId>
<version>1.0.0</version>
</dependency>
</dependencies>
</dependencyManagement>
</project>
graphdb/titan1/readme.txt 0 → 100644
==================
Titan 1.0.0 README
==================
IMPORTANT: Titan 1 support in Atlas is currently a work in progress.
ARCHITECTURE NOTES
------------------
The build is currently set up to include only one of the graph backends in the Atlas war file. The configured graph
backend is determined by maven profile. The default profile is titan0. To build Atlas configured to run against Titan 1,
the titan1 profile must be enabled. Titan1 project has support for Gremlin3. Gremlin Translator translates the DSL to
gremlin3 compliant syntax when titan1 is configured as backend graph db.
REQUIREMENTS
--------------
Titan 1 requires Java 8 to be used both when building and running Atlas. While building on Java7, the java classes in
the Titan 1 project are not compiled. But an empty jar is produced. If java 8 is used, then titan 1 classes are compiled
but tests are only executed if titan1 profile is explicitly enabled.
USING ATLAS WITH TITAN 1
------------------------
1) Build Atlas with the titan1 maven profile enabled:
mvn install -P dist -P titan1
Note that there are some tests in repository and webapp project which are skipped when running with the titan1 profile.
Please refer to known issues section below.
This will build Atlas and run all of the tests against Titan 1. Only Atlas builds that were generated with the titan1
maven profile enabled can be used to use Atlas with Titan 1.
2) Configure the Atlas runtime to use Titan 1 by setting the atlas.graphdb.backend property in
ATLAS_HOME/conf/atlas-application.properties, as follows:
atlas.graphdb.backend=org.apache.atlas.repository.graphdb.titan1.Titan1GraphDatabase
3) Attempt to start the Atlas server. NOTE: As of this writing, Atlas fails to start (see issue 2 below).
KNOWN ISSUES
------------
1) EntityLineageService is hard-coded to generate Gremlin that is specific to Tinker Pop 2. It needs to be updated to
use GremlinExpressionFactory to generate Gremlin that is appropriate for the version of Titan being used. Currently
these tests are skipped when the titan1 profile is enabled.
https://issues.apache.org/jira/browse/ATLAS-1579
2) Catalog project is hard-coded to generate Gremlin that is specific to Tinker Pop 2. It needs to be updated to use
GremlinExpressionFactory to generate Gremlin that is appropriate for the version of Titan being used. In addition, it
has direct dependencies on titan 0 / Tinker Pop 2 classes.
https://issues.apache.org/jira/browse/ATLAS-1580
3) The Atlas war file startup is currently failing when Titan1 is being used. Due to the titan 0 dependencies in
catalog, the catalog jar is currently being excluded from webapp when titan1 is being used. However, Atlas appears to
have runtime dependencies on the stuff in Catalog. The war startup currently fails with the following exception:
Caused by: java.lang.ClassNotFoundException: org.apache.atlas.catalog.exception.CatalogException
at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
at org.codehaus.plexus.classworlds.realm.ClassRealm.unsynchronizedLoadClass(ClassRealm.java:271)
https://issues.apache.org/jira/browse/ATLAS-1581
4) There are some known test failures in webapp project. Those need to be addressed. There is work needed to refactor
webapp so that it can function without catalog until issue #2 above is resolved.
https://issues.apache.org/jira/browse/ATLAS-1582
5) We cannot bundle both titan0 and titan1 in the Atlas war file because titan1 and titan0 require different versions of
the same libraries. We cannot have multiple versions of the same library on the classpath. Another issue there is that
Gremin queries are executed via the java services mechanism. Specifically, the titan 1 implemention bundles a file
called javax.script.ScriptingEngineFactory, which tells Java to
use org.apache.tinkerpop.gremlin.groovy.jsr223.GremlinGroovyScriptEngineFactory. We cannot have this file on the
classpath when using titan 0 since it would cause the Titan 0 implemention to try to execute queries using TP 3. There
may be ways of working around this, such as making Titan1Graph and Titan0Graph explicitly instantiate the
GremlinGroovyScriptEngineFactory. This was not investigated very much, though. If we combine that with shading
Titan0/1 and all of their dependencies, we might be able to bundle both the Titan 1 and Titan 0 implementations in the
Atlas war file and have things work correctly for both versions. Another possibility would be to use a custom
classloader to load the correct atlas-graphdb-titan0/1 jar during Atlas startup based on the configuration.
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/GraphDbObjectFactory.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import org.apache.atlas.repository.graphdb.AtlasCardinality;
import org.apache.atlas.repository.graphdb.AtlasGraphIndex;
import org.apache.atlas.repository.graphdb.titan1.query.Titan1GraphQuery;
import org.apache.tinkerpop.gremlin.structure.Edge;
import org.apache.tinkerpop.gremlin.structure.Vertex;
import com.thinkaurelius.titan.core.Cardinality;
import com.thinkaurelius.titan.core.PropertyKey;
import com.thinkaurelius.titan.core.schema.TitanGraphIndex;
/**
* Factory that serves up instances of graph database abstraction layer classes
* that correspond to Titan/Tinkerpop3 classes.
*/
public final class GraphDbObjectFactory {
private GraphDbObjectFactory() {
}
/**
* Creates a Titan1Edge that corresponds to the given Gremlin Edge.
*
* @param graph The graph the edge should be created in
* @param source The gremlin edge
*/
public static Titan1Edge createEdge(Titan1Graph graph, Edge source) {
if (source == null) {
return null;
}
return new Titan1Edge(graph, source);
}
/**
* Creates a Titan1GraphQuery that corresponds to the given GraphQuery.
*
* @param graph the graph that is being quried
*/
public static Titan1GraphQuery createQuery(Titan1Graph graph, boolean isChildQuery) {
return new Titan1GraphQuery(graph, isChildQuery);
}
/**
* Creates a Titan1Vertex that corresponds to the given Gremlin Vertex.
*
* @param graph The graph that contains the vertex
* @param source the Gremlin vertex
*/
public static Titan1Vertex createVertex(Titan1Graph graph, Vertex source) {
if (source == null) {
return null;
}
return new Titan1Vertex(graph, source);
}
/**
* @param propertyKey The Gremlin propertyKey.
*
*/
public static Titan1PropertyKey createPropertyKey(PropertyKey propertyKey) {
if (propertyKey == null) {
return null;
}
return new Titan1PropertyKey(propertyKey);
}
/**
* @param index The gremlin index.
* @return
*/
public static AtlasGraphIndex createGraphIndex(TitanGraphIndex index) {
if (index == null) {
return null;
}
return new Titan1GraphIndex(index);
}
/**
* Converts a Multiplicity to a Cardinality.
*
* @param cardinality
* @return
*/
public static AtlasCardinality createCardinality(Cardinality cardinality) {
if (cardinality == Cardinality.SINGLE) {
return AtlasCardinality.SINGLE;
} else if (cardinality == Cardinality.LIST) {
return AtlasCardinality.LIST;
}
return AtlasCardinality.SET;
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1Edge.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.tinkerpop.gremlin.structure.Edge;
/**
* Titan 1.0.0 implementation of AtlasEdge.
*/
public class Titan1Edge extends Titan1Element<Edge> implements AtlasEdge<Titan1Vertex, Titan1Edge> {
public Titan1Edge(Titan1Graph graph, Edge edge) {
super(graph, edge);
}
@Override
public String getLabel() {
return getWrappedElement().label();
}
@Override
public Titan1Edge getE() {
return this;
}
@Override
public AtlasVertex<Titan1Vertex, Titan1Edge> getInVertex() {
return GraphDbObjectFactory.createVertex(graph, getWrappedElement().inVertex());
}
@Override
public AtlasVertex<Titan1Vertex, Titan1Edge> getOutVertex() {
return GraphDbObjectFactory.createVertex(graph, getWrappedElement().outVertex());
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1Element.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.Iterator;
import java.util.List;
import java.util.Set;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasElement;
import org.apache.atlas.repository.graphdb.AtlasSchemaViolationException;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.titan1.graphson.AtlasGraphSONMode;
import org.apache.atlas.repository.graphdb.titan1.graphson.AtlasGraphSONUtility;
import org.apache.tinkerpop.gremlin.structure.Element;
import org.apache.tinkerpop.gremlin.structure.Property;
import org.codehaus.jettison.json.JSONException;
import org.codehaus.jettison.json.JSONObject;
import com.google.common.base.Function;
import com.google.common.collect.Lists;
import com.thinkaurelius.titan.core.SchemaViolationException;
import com.thinkaurelius.titan.core.TitanElement;
/**
* Titan 1.0.0 implementation of AtlasElement.
*
* @param <T> the implementation class of the wrapped Titan 1 element
* that is stored.
*/
public class Titan1Element<T extends Element> implements AtlasElement {
private T element;
protected Titan1Graph graph;
public Titan1Element(Titan1Graph graph, T element) {
this.element = element;
this.graph = graph;
}
@Override
public <T> T getProperty(String propertyName, Class<T> clazz) {
//add explicit logic to return null if the property does not exist
//This is the behavior Atlas expects. Titan 1 throws an exception
//in this scenario.
Property p = getWrappedElement().property(propertyName);
if (p.isPresent()) {
Object propertyValue= p.value();
if (propertyValue == null) {
return null;
}
if (AtlasEdge.class == clazz) {
return (T)graph.getEdge(propertyValue.toString());
}
if (AtlasVertex.class == clazz) {
return (T)graph.getVertex(propertyValue.toString());
}
return (T)propertyValue;
}
return null;
}
/**
* Gets all of the values of the given property.
* @param propertyName
* @return
*/
@Override
public <T> Collection<T> getPropertyValues(String propertyName, Class<T> type) {
return Collections.singleton(getProperty(propertyName, type));
}
@Override
public Set<String> getPropertyKeys() {
return getWrappedElement().keys();
}
@Override
public void removeProperty(String propertyName) {
Iterator<? extends Property<String>> it = getWrappedElement().properties(propertyName);
while(it.hasNext()) {
Property<String> property = it.next();
property.remove();
}
}
@Override
public void setProperty(String propertyName, Object value) {
try {
getWrappedElement().property(propertyName, value);
} catch(SchemaViolationException e) {
throw new AtlasSchemaViolationException(e);
}
}
@Override
public Object getId() {
return element.id();
}
//not in interface
public T getWrappedElement() {
return element;
}
@Override
public JSONObject toJson(Set<String> propertyKeys) throws JSONException {
return AtlasGraphSONUtility.jsonFromElement(this, propertyKeys, AtlasGraphSONMode.NORMAL);
}
@Override
public int hashCode() {
int result = 37;
result = 17*result + getClass().hashCode();
result = 17*result + getWrappedElement().hashCode();
return result;
}
@Override
public boolean equals(Object other) {
if (other == null) {
return false;
}
if (other.getClass() != getClass()) {
return false;
}
Titan1Element otherElement = (Titan1Element) other;
return getWrappedElement().equals(otherElement.getWrappedElement());
}
@Override
public List<String> getListProperty(String propertyName) {
List<String> value = getProperty(propertyName, List.class);
if (value == null) {
return Collections.emptyList();
}
return value;
}
@Override
public void setListProperty(String propertyName, List<String> values) {
setProperty(propertyName, values);
}
@Override
public boolean exists() {
try {
return !((TitanElement)element).isRemoved();
} catch(IllegalStateException e) {
return false;
}
}
@Override
public <T> void setJsonProperty(String propertyName, T value) {
setProperty(propertyName, value);
}
@Override
public <T> T getJsonProperty(String propertyName) {
return (T)getProperty(propertyName, String.class);
}
@Override
public String getIdForDisplay() {
return getId().toString();
}
@Override
public <V> List<V> getListProperty(String propertyName, Class<V> elementType) {
List<String> value = getListProperty(propertyName);
if (value.isEmpty()) {
return (List<V>)value;
}
if (AtlasEdge.class.isAssignableFrom(elementType)) {
return (List<V>)Lists.transform(value, new Function<String, AtlasEdge>(){
@Override
public AtlasEdge apply(String input) {
return graph.getEdge(input);
}
});
}
if (AtlasVertex.class.isAssignableFrom(elementType)) {
return (List<V>)Lists.transform(value, new Function<String, AtlasVertex>(){
@Override
public AtlasVertex apply(String input) {
return graph.getVertex(input);
}
});
}
return (List<V>)value;
}
@Override
public void setPropertyFromElementsIds(String propertyName, List<AtlasElement> values) {
List<String> propertyValue = new ArrayList<>(values.size());
for(AtlasElement value: values) {
propertyValue.add(value.getId().toString());
}
setProperty(propertyName, propertyValue);
}
@Override
public void setPropertyFromElementId(String propertyName, AtlasElement value) {
setProperty(propertyName, value.getId().toString());
}
@Override
public boolean isIdAssigned() {
return true;
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1Graph.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.io.IOException;
import java.io.OutputStream;
import java.util.Collection;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import javax.script.Bindings;
import javax.script.ScriptEngine;
import javax.script.ScriptException;
import org.apache.atlas.groovy.GroovyExpression;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.repository.graphdb.AtlasGraphManagement;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery;
import org.apache.atlas.repository.graphdb.AtlasIndexQuery;
import org.apache.atlas.repository.graphdb.AtlasSchemaViolationException;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.GremlinVersion;
import org.apache.atlas.repository.graphdb.titan1.query.Titan1GraphQuery;
import org.apache.atlas.repository.graphdb.utils.IteratorToIterableAdapter;
import org.apache.atlas.typesystem.types.IDataType;
import org.apache.tinkerpop.gremlin.groovy.CompilerCustomizerProvider;
import org.apache.tinkerpop.gremlin.groovy.DefaultImportCustomizerProvider;
import org.apache.tinkerpop.gremlin.groovy.jsr223.GremlinGroovyScriptEngine;
import org.apache.tinkerpop.gremlin.process.traversal.P;
import org.apache.tinkerpop.gremlin.process.traversal.dsl.graph.__;
import org.apache.tinkerpop.gremlin.process.traversal.step.util.ImmutablePath;
import org.apache.tinkerpop.gremlin.structure.Edge;
import org.apache.tinkerpop.gremlin.structure.Element;
import org.apache.tinkerpop.gremlin.structure.Vertex;
import org.apache.tinkerpop.gremlin.structure.io.IoCore;
import org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONMapper;
import org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONWriter;
import com.google.common.base.Function;
import com.google.common.collect.Iterables;
import com.google.common.collect.Lists;
import com.google.common.collect.Maps;
import com.thinkaurelius.titan.core.Cardinality;
import com.thinkaurelius.titan.core.PropertyKey;
import com.thinkaurelius.titan.core.SchemaViolationException;
import com.thinkaurelius.titan.core.TitanGraph;
import com.thinkaurelius.titan.core.TitanIndexQuery;
import com.thinkaurelius.titan.core.schema.TitanGraphIndex;
import com.thinkaurelius.titan.core.schema.TitanManagement;
import com.thinkaurelius.titan.core.util.TitanCleanup;
/**
* Titan 1.0.0 implementation of AtlasGraph.
*/
public class Titan1Graph implements AtlasGraph<Titan1Vertex, Titan1Edge> {
private final ConvertGremlinValueFunction GREMLIN_VALUE_CONVERSION_FUNCTION = new ConvertGremlinValueFunction();
private final class ConvertGremlinValueFunction implements Function<Object, Object> {
@Override
public Object apply(Object input) {
return convertGremlinValue(input);
}
}
private final Set<String> multiProperties;
public Titan1Graph() {
//determine multi-properties once at startup
TitanManagement mgmt = null;
try {
mgmt = Titan1GraphDatabase.getGraphInstance().openManagement();
Iterable<PropertyKey> keys = mgmt.getRelationTypes(PropertyKey.class);
multiProperties = new HashSet<>();
for (PropertyKey key : keys) {
if (key.cardinality() != Cardinality.SINGLE) {
multiProperties.add(key.name());
}
}
} finally {
if (mgmt != null) {
mgmt.rollback();
}
}
}
@Override
public AtlasEdge<Titan1Vertex, Titan1Edge> addEdge(AtlasVertex<Titan1Vertex, Titan1Edge> outVertex,
AtlasVertex<Titan1Vertex, Titan1Edge> inVertex,
String edgeLabel) {
try {
Vertex oV = outVertex.getV().getWrappedElement();
Vertex iV = inVertex.getV().getWrappedElement();
Edge edge = oV.addEdge(edgeLabel, iV);
return GraphDbObjectFactory.createEdge(this, edge);
} catch (SchemaViolationException e) {
throw new AtlasSchemaViolationException(e);
}
}
@Override
public AtlasGraphQuery<Titan1Vertex, Titan1Edge> query() {
return new Titan1GraphQuery(this);
}
@Override
public AtlasEdge<Titan1Vertex, Titan1Edge> getEdge(String edgeId) {
Iterator<Edge> it = getGraph().edges(edgeId);
Edge e = getSingleElement(it, edgeId);
return GraphDbObjectFactory.createEdge(this, e);
}
@Override
public void removeEdge(AtlasEdge<Titan1Vertex, Titan1Edge> edge) {
Edge wrapped = edge.getE().getWrappedElement();
wrapped.remove();
}
@Override
public void removeVertex(AtlasVertex<Titan1Vertex, Titan1Edge> vertex) {
Vertex wrapped = vertex.getV().getWrappedElement();
wrapped.remove();
}
@Override
public Iterable<AtlasEdge<Titan1Vertex, Titan1Edge>> getEdges() {
Iterator<Edge> edges = getGraph().edges();
return wrapEdges(edges);
}
@Override
public Iterable<AtlasVertex<Titan1Vertex, Titan1Edge>> getVertices() {
Iterator<Vertex> vertices = getGraph().vertices();
return wrapVertices(vertices);
}
@Override
public AtlasVertex<Titan1Vertex, Titan1Edge> addVertex() {
Vertex result = getGraph().addVertex();
return GraphDbObjectFactory.createVertex(this, result);
}
@Override
public void commit() {
getGraph().tx().commit();
}
@Override
public void rollback() {
getGraph().tx().rollback();
}
@Override
public AtlasIndexQuery<Titan1Vertex, Titan1Edge> indexQuery(String fulltextIndex, String graphQuery) {
TitanIndexQuery query = getGraph().indexQuery(fulltextIndex, graphQuery);
return new Titan1IndexQuery(this, query);
}
@Override
public AtlasGraphManagement getManagementSystem() {
return new Titan1GraphManagement(this, getGraph().openManagement());
}
@Override
public void shutdown() {
getGraph().close();
}
@Override
public Set<String> getEdgeIndexKeys() {
return getIndexKeys(Edge.class);
}
@Override
public Set<String> getVertexIndexKeys() {
return getIndexKeys(Vertex.class);
}
private Set<String> getIndexKeys(Class<? extends Element> titanElementClass) {
TitanManagement mgmt = getGraph().openManagement();
Iterable<TitanGraphIndex> indices = mgmt.getGraphIndexes(titanElementClass);
Set<String> result = new HashSet<String>();
for (TitanGraphIndex index : indices) {
result.add(index.name());
}
mgmt.commit();
return result;
}
@Override
public AtlasVertex<Titan1Vertex, Titan1Edge> getVertex(String vertexId) {
Iterator<Vertex> it = getGraph().vertices(vertexId);
Vertex vertex = getSingleElement(it, vertexId);
return GraphDbObjectFactory.createVertex(this, vertex);
}
public static <T> T getSingleElement(Iterator<T> it, String id) {
if (!it.hasNext()) {
return null;
}
T element = it.next();
if (it.hasNext()) {
throw new RuntimeException("Multiple items were found with the id " + id);
}
return element;
}
@Override
public Iterable<AtlasVertex<Titan1Vertex, Titan1Edge>> getVertices(String key, Object value) {
AtlasGraphQuery<Titan1Vertex, Titan1Edge> query = query();
query.has(key, value);
return query.vertices();
}
private Object convertGremlinValue(Object rawValue) {
if (rawValue instanceof Vertex) {
return GraphDbObjectFactory.createVertex(this, (Vertex) rawValue);
} else if (rawValue instanceof Edge) {
return GraphDbObjectFactory.createEdge(this, (Edge) rawValue);
} else if (rawValue instanceof Map) {
Map<String,Object> rowValue = (Map<String,Object>)rawValue;
return Maps.transformValues(rowValue, GREMLIN_VALUE_CONVERSION_FUNCTION);
} else if (rawValue instanceof ImmutablePath) {
ImmutablePath path = (ImmutablePath) rawValue;
return convertGremlinValue(path.objects());
}
else if (rawValue instanceof List) {
return Lists.transform((List)rawValue, GREMLIN_VALUE_CONVERSION_FUNCTION);
} else if (rawValue instanceof Collection) {
throw new UnsupportedOperationException("Unhandled collection type: " + rawValue.getClass());
}
return rawValue;
}
@Override
public GremlinVersion getSupportedGremlinVersion() {
return GremlinVersion.THREE;
}
@Override
public void clear() {
TitanGraph graph = getGraph();
if (graph.isOpen()) {
// only a shut down graph can be cleared
graph.close();
}
TitanCleanup.clear(graph);
}
private TitanGraph getGraph() {
return Titan1GraphDatabase.getGraphInstance();
}
@Override
public void exportToGson(OutputStream os) throws IOException {
GraphSONMapper mapper = getGraph().io(IoCore.graphson()).mapper().create();
GraphSONWriter.Builder builder = GraphSONWriter.build();
builder.mapper(mapper);
GraphSONWriter writer = builder.create();
writer.writeGraph(os, getGraph());
}
@Override
public Object executeGremlinScript(String query, boolean isPath) throws ScriptException {
Object result = executeGremlinScript(query);
return convertGremlinValue(result);
}
private Object executeGremlinScript(String gremlinQuery) throws ScriptException {
Set<String> extraImports = new HashSet<String>();
extraImports.add(java.util.function.Function.class.getName());
Set<String> extraStaticImports = new HashSet<String>();
extraStaticImports.add(P.class.getName() + ".*");
extraStaticImports.add(__.class.getName() + ".*");
CompilerCustomizerProvider provider = new DefaultImportCustomizerProvider(extraImports, extraStaticImports);
GremlinGroovyScriptEngine scriptEngine = new GremlinGroovyScriptEngine(provider);
try {
Bindings bindings = scriptEngine.createBindings();
bindings.put("graph", getGraph());
bindings.put("g", getGraph().traversal());
Object result = scriptEngine.eval(gremlinQuery, bindings);
return result;
} finally {
try {
scriptEngine.close();
} catch (Exception e) {
throw new ScriptException(e);
}
}
}
@Override
public Object executeGremlinScript(ScriptEngine scriptEngine,
Bindings bindings, String query, boolean isPath)
throws ScriptException {
if(!bindings.containsKey("g")) {
bindings.put("g", getGraph());
}
Object result = scriptEngine.eval(query, bindings);
return convertGremlinValue(result);
}
@Override
public GroovyExpression generatePersisentToLogicalConversionExpression(GroovyExpression expr, IDataType<?> type) {
//nothing special needed, value is stored in required type
return expr;
}
@Override
public boolean isPropertyValueConversionNeeded(IDataType<?> type) {
return false;
}
@Override
public boolean requiresInitialIndexedPredicate() {
return false;
}
@Override
public GroovyExpression getInitialIndexedPredicate(GroovyExpression parent) {
return parent;
}
@Override
public GroovyExpression addOutputTransformationPredicate(GroovyExpression expr, boolean isSelect, boolean isPath) {
return expr;
}
public Iterable<AtlasEdge<Titan1Vertex, Titan1Edge>> wrapEdges(Iterator<Edge> it) {
Iterable<Edge> iterable = new IteratorToIterableAdapter<Edge>(it);
return wrapEdges(iterable);
}
public Iterable<AtlasVertex<Titan1Vertex, Titan1Edge>> wrapVertices(Iterator<? extends Vertex> it) {
Iterable<? extends Vertex> iterable = new IteratorToIterableAdapter<>(it);
return wrapVertices(iterable);
}
public Iterable<AtlasVertex<Titan1Vertex, Titan1Edge>> wrapVertices(Iterable<? extends Vertex> it) {
return Iterables.transform(it, new Function<Vertex, AtlasVertex<Titan1Vertex, Titan1Edge>>() {
@Override
public AtlasVertex<Titan1Vertex, Titan1Edge> apply(Vertex input) {
return GraphDbObjectFactory.createVertex(Titan1Graph.this, input);
}
});
}
public Iterable<AtlasEdge<Titan1Vertex, Titan1Edge>> wrapEdges(Iterable<Edge> it) {
Iterable<Edge> result = (Iterable<Edge>) it;
return Iterables.transform(result, new Function<Edge, AtlasEdge<Titan1Vertex, Titan1Edge>>() {
@Override
public AtlasEdge<Titan1Vertex, Titan1Edge> apply(Edge input) {
return GraphDbObjectFactory.createEdge(Titan1Graph.this, input);
}
});
}
@Override
public boolean isMultiProperty(String propertyName) {
return multiProperties.contains(propertyName);
}
public void addMultiProperties(Set<String> names) {
multiProperties.addAll(names);
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1GraphDatabase.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.ArrayList;
import org.apache.atlas.ApplicationProperties;
import org.apache.atlas.AtlasException;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.repository.graphdb.GraphDatabase;
import org.apache.atlas.repository.graphdb.titan1.serializer.BigDecimalSerializer;
import org.apache.atlas.repository.graphdb.titan1.serializer.BigIntegerSerializer;
import org.apache.atlas.repository.graphdb.titan1.serializer.StringListSerializer;
import org.apache.atlas.repository.graphdb.titan1.serializer.TypeCategorySerializer;
import org.apache.atlas.typesystem.types.DataTypes.TypeCategory;
import org.apache.commons.configuration.Configuration;
import org.apache.tinkerpop.gremlin.groovy.loaders.SugarLoader;
import org.apache.tinkerpop.gremlin.structure.io.graphson.GraphSONMapper;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.thinkaurelius.titan.core.TitanFactory;
import com.thinkaurelius.titan.core.TitanGraph;
import com.thinkaurelius.titan.core.schema.TitanManagement;
import com.thinkaurelius.titan.core.util.TitanCleanup;
import com.thinkaurelius.titan.graphdb.tinkerpop.TitanIoRegistry;
/**
* Default implementation for Graph Provider that doles out Titan Graph.
*/
public class Titan1GraphDatabase implements GraphDatabase<Titan1Vertex, Titan1Edge> {
private static final Logger LOG = LoggerFactory.getLogger(Titan1GraphDatabase.class);
/**
* Constant for the configuration property that indicates the prefix.
*/
public static final String GRAPH_PREFIX = "atlas.graph";
public static final String INDEX_BACKEND_CONF = "index.search.backend";
public static final String INDEX_BACKEND_LUCENE = "lucene";
public static final String INDEX_BACKEND_ES = "elasticsearch";
private static volatile Titan1Graph atlasGraphInstance = null;
private static volatile TitanGraph graphInstance;
public Titan1GraphDatabase() {
//update registry
GraphSONMapper.build().addRegistry(TitanIoRegistry.INSTANCE).create();
}
public static Configuration getConfiguration() throws AtlasException {
Configuration configProperties = ApplicationProperties.get();
Configuration titanConfig = ApplicationProperties.getSubsetConfiguration(configProperties, GRAPH_PREFIX);
//add serializers for non-standard property value types that Atlas uses
titanConfig.addProperty("attributes.custom.attribute1.attribute-class", TypeCategory.class.getName());
titanConfig.addProperty("attributes.custom.attribute1.serializer-class",
TypeCategorySerializer.class.getName());
//not ideal, but avoids making large changes to Atlas
titanConfig.addProperty("attributes.custom.attribute2.attribute-class", ArrayList.class.getName());
titanConfig.addProperty("attributes.custom.attribute2.serializer-class", StringListSerializer.class.getName());
titanConfig.addProperty("attributes.custom.attribute3.attribute-class", BigInteger.class.getName());
titanConfig.addProperty("attributes.custom.attribute3.serializer-class", BigIntegerSerializer.class.getName());
titanConfig.addProperty("attributes.custom.attribute4.attribute-class", BigDecimal.class.getName());
titanConfig.addProperty("attributes.custom.attribute4.serializer-class", BigDecimalSerializer.class.getName());
return titanConfig;
}
public static TitanGraph getGraphInstance() {
if (graphInstance == null) {
synchronized (Titan1GraphDatabase.class) {
if (graphInstance == null) {
Configuration config;
try {
config = getConfiguration();
} catch (AtlasException e) {
throw new RuntimeException(e);
}
graphInstance = TitanFactory.open(config);
atlasGraphInstance = new Titan1Graph();
validateIndexBackend(config);
}
}
}
return graphInstance;
}
public static void unload() {
synchronized (Titan1GraphDatabase.class) {
if (graphInstance == null) {
return;
}
graphInstance.tx().commit();
graphInstance.close();
graphInstance = null;
}
}
static void validateIndexBackend(Configuration config) {
String configuredIndexBackend = config.getString(INDEX_BACKEND_CONF);
TitanManagement managementSystem = getGraphInstance().openManagement();
String currentIndexBackend = managementSystem.get(INDEX_BACKEND_CONF);
managementSystem.commit();
if (!configuredIndexBackend.equals(currentIndexBackend)) {
throw new RuntimeException("Configured Index Backend " + configuredIndexBackend
+ " differs from earlier configured Index Backend " + currentIndexBackend + ". Aborting!");
}
}
@Override
public boolean isGraphLoaded() {
return graphInstance != null;
}
@Override
public void initializeTestGraph() {
//nothing to do
}
@Override
public void cleanup() {
try {
getGraphInstance().close();
} catch (Throwable t) {
LOG.warn("Could not close test TitanGraph", t);
t.printStackTrace();
}
try {
TitanCleanup.clear(getGraphInstance());
} catch (Throwable t) {
LOG.warn("Could not clear test TitanGraph", t);
t.printStackTrace();
}
}
@Override
public AtlasGraph<Titan1Vertex, Titan1Edge> getGraph() {
getGraphInstance();
return atlasGraphInstance;
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1GraphIndex.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.util.HashSet;
import java.util.Set;
import org.apache.atlas.repository.graphdb.AtlasGraphIndex;
import org.apache.atlas.repository.graphdb.AtlasPropertyKey;
import org.apache.tinkerpop.gremlin.structure.Edge;
import org.apache.tinkerpop.gremlin.structure.Vertex;
import com.thinkaurelius.titan.core.PropertyKey;
import com.thinkaurelius.titan.core.schema.TitanGraphIndex;
/**
* Represents an Index in Titan 1.
*/
public class Titan1GraphIndex implements AtlasGraphIndex {
private TitanGraphIndex wrapped;
public Titan1GraphIndex(TitanGraphIndex toWrap) {
this.wrapped = toWrap;
}
@Override
public boolean isEdgeIndex() {
return Edge.class.isAssignableFrom(wrapped.getIndexedElement());
}
@Override
public boolean isVertexIndex() {
return Vertex.class.isAssignableFrom(wrapped.getIndexedElement());
}
@Override
public boolean isUnique() {
return wrapped.isUnique();
}
@Override
public Set<AtlasPropertyKey> getFieldKeys() {
PropertyKey[] keys = wrapped.getFieldKeys();
Set<AtlasPropertyKey> result = new HashSet<AtlasPropertyKey>();
for(PropertyKey key : keys) {
result.add(GraphDbObjectFactory.createPropertyKey(key));
}
return result;
}
@Override
public int hashCode() {
int result = 17;
result = 37*result + wrapped.hashCode();
return result;
}
@Override
public boolean equals(Object other) {
if (!(other instanceof Titan1GraphIndex)) {
return false;
}
Titan1GraphIndex otherKey = (Titan1GraphIndex)other;
return otherKey.wrapped.equals(wrapped);
}
@Override
public boolean isMixedIndex() {
return wrapped.isMixedIndex();
}
@Override
public boolean isCompositeIndex() {
return wrapped.isCompositeIndex();
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1GraphManagement.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
import org.apache.atlas.repository.graphdb.AtlasCardinality;
import org.apache.atlas.repository.graphdb.AtlasGraphIndex;
import org.apache.atlas.repository.graphdb.AtlasGraphManagement;
import org.apache.atlas.repository.graphdb.AtlasPropertyKey;
import org.apache.commons.lang.StringUtils;
import org.apache.tinkerpop.gremlin.structure.Edge;
import org.apache.tinkerpop.gremlin.structure.Element;
import org.apache.tinkerpop.gremlin.structure.Vertex;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.common.base.Preconditions;
import com.thinkaurelius.titan.core.Cardinality;
import com.thinkaurelius.titan.core.PropertyKey;
import com.thinkaurelius.titan.core.schema.Mapping;
import com.thinkaurelius.titan.core.schema.PropertyKeyMaker;
import com.thinkaurelius.titan.core.schema.TitanGraphIndex;
import com.thinkaurelius.titan.core.schema.TitanManagement;
import com.thinkaurelius.titan.graphdb.internal.Token;
/**
* Titan 1.0.0 implementation of AtlasGraphManagement.
*/
public class Titan1GraphManagement implements AtlasGraphManagement {
private static final Logger LOG = LoggerFactory.getLogger(Titan1GraphManagement.class);
private static final char[] RESERVED_CHARS = { '{', '}', '"', '$', Token.SEPARATOR_CHAR };
private Titan1Graph graph;
private TitanManagement management;
private Set<String> newMultProperties = new HashSet<>();
public Titan1GraphManagement(Titan1Graph graph, TitanManagement managementSystem) {
this.management = managementSystem;
this.graph = graph;
}
@Override
public void createVertexIndex(String propertyName, String backingIndex, List<AtlasPropertyKey> propertyKeys) {
TitanManagement.IndexBuilder indexBuilder = management.buildIndex(propertyName, Vertex.class);
for (AtlasPropertyKey key : propertyKeys) {
PropertyKey titanKey = TitanObjectFactory.createPropertyKey(key);
indexBuilder.addKey(titanKey);
}
indexBuilder.buildMixedIndex(backingIndex);
}
@Override
public void createEdgeIndex(String index, String backingIndex) {
buildMixedIndex(index, Edge.class, backingIndex);
}
private void buildMixedIndex(String index, Class<? extends Element> titanClass, String backingIndex) {
management.buildIndex(index, titanClass).buildMixedIndex(backingIndex);
}
@Override
public void createFullTextIndex(String indexName, AtlasPropertyKey propertyKey, String backingIndex) {
PropertyKey fullText = TitanObjectFactory.createPropertyKey(propertyKey);
management.buildIndex(indexName, Vertex.class)
.addKey(fullText, com.thinkaurelius.titan.core.schema.Parameter.of("mapping", Mapping.TEXT))
.buildMixedIndex(backingIndex);
}
@Override
public boolean containsPropertyKey(String propertyName) {
return management.containsPropertyKey(propertyName);
}
@Override
public void rollback() {
management.rollback();
}
@Override
public void commit() {
graph.addMultiProperties(newMultProperties);
newMultProperties.clear();
management.commit();
}
private static void checkName(String name) {
//for some reason, name checking was removed from StandardPropertyKeyMaker.make()
//in titan 1. For consistency, do the check here.
Preconditions.checkArgument(StringUtils.isNotBlank(name), "Need to specify name");
for (char c : RESERVED_CHARS) {
Preconditions.checkArgument(name.indexOf(c) < 0, "Name can not contains reserved character %s: %s", c,
name);
}
}
@Override
public AtlasPropertyKey makePropertyKey(String propertyName, Class propertyClass, AtlasCardinality cardinality) {
if (cardinality.isMany()) {
newMultProperties.add(propertyName);
}
PropertyKeyMaker propertyKeyBuilder = management.makePropertyKey(propertyName).dataType(propertyClass);
if (cardinality != null) {
Cardinality titanCardinality = TitanObjectFactory.createCardinality(cardinality);
propertyKeyBuilder.cardinality(titanCardinality);
}
PropertyKey propertyKey = propertyKeyBuilder.make();
return GraphDbObjectFactory.createPropertyKey(propertyKey);
}
@Override
public AtlasPropertyKey getPropertyKey(String propertyName) {
checkName(propertyName);
return GraphDbObjectFactory.createPropertyKey(management.getPropertyKey(propertyName));
}
public void createExactMatchVertexIndex(String propertyName, boolean enforceUniqueness,
List<AtlasPropertyKey> propertyKeys) {
TitanManagement.IndexBuilder indexBuilder = management.buildIndex(propertyName, Vertex.class);
for (AtlasPropertyKey key : propertyKeys) {
PropertyKey titanKey = TitanObjectFactory.createPropertyKey(key);
indexBuilder.addKey(titanKey);
}
if (enforceUniqueness) {
indexBuilder.unique();
}
indexBuilder.buildCompositeIndex();
}
@Override
public void addVertexIndexKey(String indexName, AtlasPropertyKey propertyKey) {
PropertyKey titanKey = TitanObjectFactory.createPropertyKey(propertyKey);
TitanGraphIndex vertexIndex = management.getGraphIndex(indexName);
management.addIndexKey(vertexIndex, titanKey);
}
@Override
public AtlasGraphIndex getGraphIndex(String indexName) {
TitanGraphIndex index = management.getGraphIndex(indexName);
return GraphDbObjectFactory.createGraphIndex(index);
}
@Override
public void createExactMatchIndex(String propertyName, boolean isUnique,
List<AtlasPropertyKey> propertyKeys) {
createExactMatchVertexIndex(propertyName, isUnique, propertyKeys);
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1IndexQuery.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.util.Iterator;
import org.apache.atlas.repository.graphdb.AtlasIndexQuery;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import com.google.common.base.Function;
import com.google.common.collect.Iterators;
import com.thinkaurelius.titan.core.TitanIndexQuery;
import com.thinkaurelius.titan.core.TitanVertex;
/**
* Titan 1.0.0 implementation of AtlasIndexQuery.
*/
public class Titan1IndexQuery implements AtlasIndexQuery<Titan1Vertex, Titan1Edge> {
private Titan1Graph graph;
private TitanIndexQuery query;
public Titan1IndexQuery(Titan1Graph graph, TitanIndexQuery query) {
this.query = query;
this.graph = graph;
}
@Override
public Iterator<Result<Titan1Vertex, Titan1Edge>> vertices() {
Iterator<TitanIndexQuery.Result<TitanVertex>> results = query.vertices().iterator();
Function<TitanIndexQuery.Result<TitanVertex>, Result<Titan1Vertex, Titan1Edge>> function =
new Function<TitanIndexQuery.Result<TitanVertex>, Result<Titan1Vertex, Titan1Edge>>() {
@Override
public Result<Titan1Vertex, Titan1Edge> apply(TitanIndexQuery.Result<TitanVertex> source) {
return new ResultImpl(source);
}
};
return Iterators.transform(results, function);
}
/**
* Titan 1.0.0 implementation of AtlasIndexQuery.Result.
*/
public final class ResultImpl implements AtlasIndexQuery.Result<Titan1Vertex, Titan1Edge> {
private TitanIndexQuery.Result<TitanVertex> source;
public ResultImpl(TitanIndexQuery.Result<TitanVertex> source) {
this.source = source;
}
@Override
public AtlasVertex<Titan1Vertex, Titan1Edge> getVertex() {
return GraphDbObjectFactory.createVertex(graph, source.getElement());
}
@Override
public double getScore() {
return source.getScore();
}
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1PropertyKey.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import org.apache.atlas.repository.graphdb.AtlasCardinality;
import org.apache.atlas.repository.graphdb.AtlasPropertyKey;
import com.thinkaurelius.titan.core.PropertyKey;
/**
*
*/
public class Titan1PropertyKey implements AtlasPropertyKey {
private PropertyKey wrapped;
public Titan1PropertyKey(PropertyKey toWrap) {
wrapped = toWrap;
}
/* (non-Javadoc)
* @see org.apache.atlas.repository.graphdb.AtlasPropertyKey#getName()
*/
@Override
public String getName() {
return wrapped.name();
}
/**
* @return
*/
public PropertyKey getWrappedPropertyKey() {
return wrapped;
}
@Override
public int hashCode() {
int result = 17;
result = 37*result + wrapped.hashCode();
return result;
}
@Override
public boolean equals(Object other) {
if (!(other instanceof Titan1PropertyKey)) {
return false;
}
Titan1PropertyKey otherKey = (Titan1PropertyKey)other;
return otherKey.getWrappedPropertyKey().equals(getWrappedPropertyKey());
}
/* (non-Javadoc)
* @see org.apache.atlas.repository.graphdb.AtlasPropertyKey#getCardinality()
*/
@Override
public AtlasCardinality getCardinality() {
return GraphDbObjectFactory.createCardinality(wrapped.cardinality());
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1Vertex.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Iterator;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasEdgeDirection;
import org.apache.atlas.repository.graphdb.AtlasSchemaViolationException;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.AtlasVertexQuery;
import org.apache.tinkerpop.gremlin.structure.Direction;
import org.apache.tinkerpop.gremlin.structure.Edge;
import org.apache.tinkerpop.gremlin.structure.Vertex;
import org.apache.tinkerpop.gremlin.structure.VertexProperty;
import com.thinkaurelius.titan.core.SchemaViolationException;
import com.thinkaurelius.titan.core.TitanVertex;
/**
* Titan 1.0.0 implementation of AtlasVertex.
*/
public class Titan1Vertex extends Titan1Element<Vertex> implements AtlasVertex<Titan1Vertex, Titan1Edge> {
public Titan1Vertex(Titan1Graph graph, Vertex source) {
super(graph, source);
}
@Override
public <T> void addProperty(String propertyName, T value) {
try {
getWrappedElement().property(VertexProperty.Cardinality.set, propertyName, value);
} catch(SchemaViolationException e) {
throw new AtlasSchemaViolationException(e);
}
}
@Override
public Iterable<AtlasEdge<Titan1Vertex, Titan1Edge>> getEdges(AtlasEdgeDirection dir, String edgeLabel) {
Direction d = TitanObjectFactory.createDirection(dir);
Iterator<Edge> edges = getWrappedElement().edges(d, edgeLabel);
return graph.wrapEdges(edges);
}
private TitanVertex getAsTitanVertex() {
return (TitanVertex)getWrappedElement();
}
@Override
public Iterable<AtlasEdge<Titan1Vertex, Titan1Edge>> getEdges(AtlasEdgeDirection in) {
Direction d = TitanObjectFactory.createDirection(in);
Iterator<Edge> edges = getWrappedElement().edges(d);
return graph.wrapEdges(edges);
}
@Override
public <T> Collection<T> getPropertyValues(String propertyName, Class<T> clazz) {
Collection<T> result = new ArrayList<T>();
Iterator<VertexProperty<T>> it = getWrappedElement().properties(propertyName);
while(it.hasNext()) {
result.add(it.next().value());
}
return result;
}
@Override
public AtlasVertexQuery<Titan1Vertex, Titan1Edge> query() {
return new Titan1VertexQuery(graph, getAsTitanVertex().query());
}
@Override
public Titan1Vertex getV() {
return this;
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/Titan1VertexQuery.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasEdgeDirection;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.AtlasVertexQuery;
import com.thinkaurelius.titan.core.TitanVertexQuery;
/**
* Titan 1.0.0 implementation of AtlasVertexQuery.
*/
public class Titan1VertexQuery implements AtlasVertexQuery<Titan1Vertex, Titan1Edge> {
private Titan1Graph graph;
private TitanVertexQuery<?> query;
public Titan1VertexQuery(Titan1Graph graph, TitanVertexQuery<?> query) {
this.query = query;
this.graph = graph;
}
@Override
public AtlasVertexQuery<Titan1Vertex, Titan1Edge> direction(AtlasEdgeDirection queryDirection) {
query.direction(TitanObjectFactory.createDirection(queryDirection));
return this;
}
@Override
public Iterable<AtlasVertex<Titan1Vertex, Titan1Edge>> vertices() {
Iterable vertices = query.vertices();
return graph.wrapVertices(vertices);
}
@Override
public Iterable<AtlasEdge<Titan1Vertex, Titan1Edge>> edges() {
Iterable edges = query.edges();
return graph.wrapEdges(edges);
}
@Override
public long count() {
return query.count();
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/TitanObjectFactory.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import org.apache.atlas.repository.graphdb.AtlasCardinality;
import org.apache.atlas.repository.graphdb.AtlasEdgeDirection;
import org.apache.atlas.repository.graphdb.AtlasPropertyKey;
import org.apache.tinkerpop.gremlin.structure.Direction;
import com.thinkaurelius.titan.core.Cardinality;
import com.thinkaurelius.titan.core.PropertyKey;
/**
* Factory that serves up instances of Titan/Tinkerpop classes that correspond to
* graph database abstraction layer/Atlas classes.
*/
public final class TitanObjectFactory {
private TitanObjectFactory() {
}
/**
* Retrieves the titan direction corresponding to the given
* AtlasEdgeDirection.
*
* @param dir
* @return
*/
public static Direction createDirection(AtlasEdgeDirection dir) {
switch(dir) {
case IN:
return Direction.IN;
case OUT:
return Direction.OUT;
case BOTH:
return Direction.BOTH;
default:
throw new RuntimeException("Unrecognized direction: " + dir);
}
}
/**
* Converts a Multiplicity to a Cardinality.
*
* @param multiplicity
* @return
*/
public static Cardinality createCardinality(AtlasCardinality cardinality) {
switch(cardinality) {
case SINGLE:
return Cardinality.SINGLE;
case LIST:
return Cardinality.LIST;
case SET:
return Cardinality.SET;
default:
throw new IllegalStateException("Unrecognized cardinality: " + cardinality);
}
}
public static PropertyKey createPropertyKey(AtlasPropertyKey key) {
return ((Titan1PropertyKey)key).getWrappedPropertyKey();
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/graphson/AtlasElementPropertyConfig.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.graphson;
import java.util.ArrayList;
import java.util.Collections;
import java.util.List;
import java.util.Set;
/**
* Configure how the GraphSON utility treats edge and vertex properties.
*
* @author Stephen Mallette (http://stephen.genoprime.com)
*/
public class AtlasElementPropertyConfig {
/**
* Rules for element properties.
*/
public enum ElementPropertiesRule {
INCLUDE, EXCLUDE
}
private final List<String> vertexPropertyKeys;
private final List<String> edgePropertyKeys;
private final ElementPropertiesRule vertexPropertiesRule;
private final ElementPropertiesRule edgePropertiesRule;
private final boolean normalized;
/**
* A configuration that includes all properties of vertices and edges.
*/
public static final AtlasElementPropertyConfig ALL_PROPERTIES = new AtlasElementPropertyConfig(null, null,
ElementPropertiesRule.INCLUDE, ElementPropertiesRule.INCLUDE, false);
public AtlasElementPropertyConfig(final Set<String> vertexPropertyKeys, final Set<String> edgePropertyKeys,
final ElementPropertiesRule vertexPropertiesRule, final ElementPropertiesRule edgePropertiesRule) {
this(vertexPropertyKeys, edgePropertyKeys, vertexPropertiesRule, edgePropertiesRule, false);
}
public AtlasElementPropertyConfig(final Set<String> vertexPropertyKeys, final Set<String> edgePropertyKeys,
final ElementPropertiesRule vertexPropertiesRule, final ElementPropertiesRule edgePropertiesRule,
final boolean normalized) {
this.vertexPropertiesRule = vertexPropertiesRule;
this.vertexPropertyKeys = sortKeys(vertexPropertyKeys, normalized);
this.edgePropertiesRule = edgePropertiesRule;
this.edgePropertyKeys = sortKeys(edgePropertyKeys, normalized);
this.normalized = normalized;
}
/**
* Construct a configuration that includes the specified properties from
* both vertices and edges.
*/
public static AtlasElementPropertyConfig includeProperties(final Set<String> vertexPropertyKeys,
final Set<String> edgePropertyKeys) {
return new AtlasElementPropertyConfig(vertexPropertyKeys, edgePropertyKeys, ElementPropertiesRule.INCLUDE,
ElementPropertiesRule.INCLUDE);
}
public static AtlasElementPropertyConfig includeProperties(final Set<String> vertexPropertyKeys,
final Set<String> edgePropertyKeys,
final boolean normalized) {
return new AtlasElementPropertyConfig(vertexPropertyKeys, edgePropertyKeys, ElementPropertiesRule.INCLUDE,
ElementPropertiesRule.INCLUDE, normalized);
}
/**
* Construct a configuration that excludes the specified properties from
* both vertices and edges.
*/
public static AtlasElementPropertyConfig excludeProperties(final Set<String> vertexPropertyKeys,
final Set<String> edgePropertyKeys) {
return new AtlasElementPropertyConfig(vertexPropertyKeys, edgePropertyKeys, ElementPropertiesRule.EXCLUDE,
ElementPropertiesRule.EXCLUDE);
}
public static AtlasElementPropertyConfig excludeProperties(final Set<String> vertexPropertyKeys,
final Set<String> edgePropertyKeys,
final boolean normalized) {
return new AtlasElementPropertyConfig(vertexPropertyKeys, edgePropertyKeys, ElementPropertiesRule.EXCLUDE,
ElementPropertiesRule.EXCLUDE, normalized);
}
public List<String> getVertexPropertyKeys() {
return vertexPropertyKeys;
}
public List<String> getEdgePropertyKeys() {
return edgePropertyKeys;
}
public ElementPropertiesRule getVertexPropertiesRule() {
return vertexPropertiesRule;
}
public ElementPropertiesRule getEdgePropertiesRule() {
return edgePropertiesRule;
}
public boolean isNormalized() {
return normalized;
}
private static List<String> sortKeys(final Set<String> keys, final boolean normalized) {
final List<String> propertyKeyList;
if (keys != null) {
if (normalized) {
final List<String> sorted = new ArrayList<String>(keys);
Collections.sort(sorted);
propertyKeyList = sorted;
} else {
propertyKeyList = new ArrayList<String>(keys);
}
} else {
propertyKeyList = null;
}
return propertyKeyList;
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/graphson/AtlasGraphSONMode.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.graphson;
/**
* Modes of operation of the GraphSONUtility.
*
* @author Stephen Mallette
*/
public enum AtlasGraphSONMode {
/**
* COMPACT constructs GraphSON on the assumption that all property keys
* are fair game for exclusion including _type, _inV, _outV, _label and _id.
* It is possible to write GraphSON that cannot be read back into Graph,
* if some or all of these keys are excluded.
*/
COMPACT,
/**
* NORMAL includes the _type field and JSON data typing.
*/
NORMAL,
/**
* EXTENDED includes the _type field and explicit data typing.
*/
EXTENDED
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/graphson/AtlasGraphSONTokens.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.graphson;
/**
* @author Stephen Mallette (http://stephen.genoprime.com)
*/
public final class AtlasGraphSONTokens {
private AtlasGraphSONTokens() {}
public static final String VERTEX = "vertex";
public static final String EDGE = "edge";
public static final String INTERNAL_ID = "_id";
public static final String INTERNAL_LABEL = "_label";
public static final String INTERNAL_TYPE = "_type";
public static final String INTERNAL_OUT_V = "_outV";
public static final String INTERNAL_IN_V = "_inV";
public static final String VALUE = "value";
public static final String TYPE = "type";
public static final String TYPE_LIST = "list";
public static final String TYPE_STRING = "string";
public static final String TYPE_DOUBLE = "double";
public static final String TYPE_INTEGER = "integer";
public static final String TYPE_FLOAT = "float";
public static final String TYPE_MAP = "map";
public static final String TYPE_BOOLEAN = "boolean";
public static final String TYPE_LONG = "long";
public static final String TYPE_SHORT = "short";
public static final String TYPE_BYTE = "byte";
public static final String TYPE_UNKNOWN = "unknown";
public static final String VERTICES = "vertices";
public static final String EDGES = "edges";
public static final String MODE = "mode";
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/graphson/AtlasGraphSONUtility.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.graphson;
import java.io.IOException;
import java.lang.reflect.Array;
import java.util.ArrayList;
import java.util.Collections;
import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Set;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasElement;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.titan1.graphson.AtlasElementPropertyConfig.ElementPropertiesRule;
import org.codehaus.jettison.json.JSONException;
import org.codehaus.jettison.json.JSONObject;
import org.codehaus.jettison.json.JSONTokener;
import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.databind.node.ArrayNode;
import com.fasterxml.jackson.databind.node.JsonNodeFactory;
import com.fasterxml.jackson.databind.node.ObjectNode;
/**
* This class was largely removed from tinkerpop 1. We're adding it back here to
* avoid changing the format of the JSON that we produce.
*
* Helps write individual graph elements to TinkerPop JSON format known as
* GraphSON.
*
* @author Stephen Mallette (http://stephen.genoprime.com)
*/
public final class AtlasGraphSONUtility {
private static final JsonNodeFactory JSON_NODE_FACTORY = JsonNodeFactory.instance;
private static final ObjectMapper MAPPER = new ObjectMapper();
private final AtlasGraphSONMode mode;
private final List<String> vertexPropertyKeys;
private final List<String> edgePropertyKeys;
private final ElementPropertiesRule vertexPropertiesRule;
private final ElementPropertiesRule edgePropertiesRule;
private final boolean normalized;
private final boolean includeReservedVertexId;
private final boolean includeReservedEdgeId;
private final boolean includeReservedVertexType;
private final boolean includeReservedEdgeType;
private final boolean includeReservedEdgeLabel;
private final boolean includeReservedEdgeOutV;
private final boolean includeReservedEdgeInV;
/**
* A GraphSONUtility that includes the specified properties.
*/
private AtlasGraphSONUtility(final AtlasGraphSONMode mode, final Set<String> vertexPropertyKeySet,
final Set<String> edgePropertyKeySet) {
AtlasElementPropertyConfig config = AtlasElementPropertyConfig.includeProperties(vertexPropertyKeySet,
edgePropertyKeySet);
this.vertexPropertyKeys = config.getVertexPropertyKeys();
this.edgePropertyKeys = config.getEdgePropertyKeys();
this.vertexPropertiesRule = config.getVertexPropertiesRule();
this.edgePropertiesRule = config.getEdgePropertiesRule();
this.normalized = config.isNormalized();
this.mode = mode;
this.includeReservedVertexId = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_ID, vertexPropertyKeys,
this.vertexPropertiesRule);
this.includeReservedEdgeId = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_ID, edgePropertyKeys,
this.edgePropertiesRule);
this.includeReservedVertexType = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_TYPE, vertexPropertyKeys,
this.vertexPropertiesRule);
this.includeReservedEdgeType = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_TYPE, edgePropertyKeys,
this.edgePropertiesRule);
this.includeReservedEdgeLabel = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_LABEL, edgePropertyKeys,
this.edgePropertiesRule);
this.includeReservedEdgeOutV = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_OUT_V, edgePropertyKeys,
this.edgePropertiesRule);
this.includeReservedEdgeInV = includeReservedKey(mode, AtlasGraphSONTokens.INTERNAL_IN_V, edgePropertyKeys,
this.edgePropertiesRule);
}
/*
* Creates GraphSON for a single graph element.
*/
private JSONObject jsonFromElement(final AtlasElement element) throws JSONException {
final ObjectNode objectNode = this.objectNodeFromElement(element);
try {
return new JSONObject(new JSONTokener(MAPPER.writeValueAsString(objectNode)));
} catch (IOException ioe) {
// repackage this as a JSONException...seems sensible as the caller will only know about
// the jettison object not being created
throw new JSONException(ioe);
}
}
/**
* Creates GraphSON for a single graph element.
*/
private ObjectNode objectNodeFromElement(final AtlasElement element) {
final boolean isEdge = element instanceof AtlasEdge;
final boolean showTypes = mode == AtlasGraphSONMode.EXTENDED;
final List<String> propertyKeys = isEdge ? this.edgePropertyKeys : this.vertexPropertyKeys;
final ElementPropertiesRule elementPropertyConfig = isEdge ? this.edgePropertiesRule
: this.vertexPropertiesRule;
final ObjectNode jsonElement = createJSONMap(
createPropertyMap(element, propertyKeys, elementPropertyConfig, normalized), propertyKeys, showTypes);
if ((isEdge && this.includeReservedEdgeId) || (!isEdge && this.includeReservedVertexId)) {
putObject(jsonElement, AtlasGraphSONTokens.INTERNAL_ID, element.getId());
}
// it's important to keep the order of these straight. check AtlasEdge first and then AtlasVertex because there
// are graph implementations that have AtlasEdge extend from AtlasVertex
if (element instanceof AtlasEdge) {
final AtlasEdge edge = (AtlasEdge) element;
if (this.includeReservedEdgeId) {
putObject(jsonElement, AtlasGraphSONTokens.INTERNAL_ID, element.getId());
}
if (this.includeReservedEdgeType) {
jsonElement.put(AtlasGraphSONTokens.INTERNAL_TYPE, AtlasGraphSONTokens.EDGE);
}
if (this.includeReservedEdgeOutV) {
putObject(jsonElement, AtlasGraphSONTokens.INTERNAL_OUT_V, edge.getOutVertex().getId());
}
if (this.includeReservedEdgeInV) {
putObject(jsonElement, AtlasGraphSONTokens.INTERNAL_IN_V, edge.getInVertex().getId());
}
if (this.includeReservedEdgeLabel) {
jsonElement.put(AtlasGraphSONTokens.INTERNAL_LABEL, edge.getLabel());
}
} else if (element instanceof AtlasVertex) {
if (this.includeReservedVertexId) {
putObject(jsonElement, AtlasGraphSONTokens.INTERNAL_ID, element.getId());
}
if (this.includeReservedVertexType) {
jsonElement.put(AtlasGraphSONTokens.INTERNAL_TYPE, AtlasGraphSONTokens.VERTEX);
}
}
return jsonElement;
}
/**
* Creates a Jettison JSONObject from a graph element.
*
* @param element
* the graph element to convert to JSON.
* @param propertyKeys
* The property getPropertyKeys() at the root of the element to
* serialize. If null, then all getPropertyKeys() are serialized.
* @param mode
* the type of GraphSON to be generated.
*/
public static JSONObject jsonFromElement(final AtlasElement element, final Set<String> propertyKeys,
final AtlasGraphSONMode mode)
throws JSONException {
final AtlasGraphSONUtility graphson = element instanceof AtlasEdge
? new AtlasGraphSONUtility(mode, null, propertyKeys)
: new AtlasGraphSONUtility(mode, propertyKeys, null);
return graphson.jsonFromElement(element);
}
private static ObjectNode objectNodeFromElement(final AtlasElement element, final List<String> propertyKeys,
final AtlasGraphSONMode mode) {
final AtlasGraphSONUtility graphson = element instanceof AtlasEdge
? new AtlasGraphSONUtility(mode, null, new HashSet<String>(propertyKeys))
: new AtlasGraphSONUtility(mode, new HashSet<String>(propertyKeys), null);
return graphson.objectNodeFromElement(element);
}
private static boolean includeReservedKey(final AtlasGraphSONMode mode, final String key,
final List<String> propertyKeys, final ElementPropertiesRule rule) {
// the key is always included in modes other than compact. if it is compact, then validate that the
// key is in the property key list
return mode != AtlasGraphSONMode.COMPACT || includeKey(key, propertyKeys, rule);
}
private static boolean includeKey(final String key, final List<String> propertyKeys,
final ElementPropertiesRule rule) {
if (propertyKeys == null) {
// when null always include the key and shortcut this piece
return true;
}
// default the key situation. if it's included then it should be explicitly defined in the
// property getPropertyKeys() list to be included or the reverse otherwise
boolean keySituation = rule == ElementPropertiesRule.INCLUDE;
switch (rule) {
case INCLUDE:
keySituation = propertyKeys.contains(key);
break;
case EXCLUDE:
keySituation = !propertyKeys.contains(key);
break;
default:
throw new RuntimeException("Unhandled rule: " + rule);
}
return keySituation;
}
private static ArrayNode createJSONList(final List<Object> list, final List<String> propertyKeys,
final boolean showTypes) {
final ArrayNode jsonList = JSON_NODE_FACTORY.arrayNode();
for (Object item : list) {
if (item instanceof AtlasElement) {
jsonList.add(objectNodeFromElement((AtlasElement) item, propertyKeys,
showTypes ? AtlasGraphSONMode.EXTENDED : AtlasGraphSONMode.NORMAL));
} else if (item instanceof List) {
jsonList.add(createJSONList((List<Object>) item, propertyKeys, showTypes));
} else if (item instanceof Map) {
jsonList.add(createJSONMap((Map<String, Object>) item, propertyKeys, showTypes));
} else if (item != null && item.getClass().isArray()) {
jsonList.add(createJSONList(convertArrayToList(item), propertyKeys, showTypes));
} else {
addObject(jsonList, item);
}
}
return jsonList;
}
private static ObjectNode createJSONMap(final Map<String, Object> map, final List<String> propertyKeys,
final boolean showTypes) {
final ObjectNode jsonMap = JSON_NODE_FACTORY.objectNode();
for (Object key : map.keySet()) {
Object value = map.get(key);
if (value != null) {
if (value instanceof List) {
value = createJSONList((List<Object>) value, propertyKeys, showTypes);
} else if (value instanceof Map) {
value = createJSONMap((Map<String, Object>) value, propertyKeys, showTypes);
} else if (value instanceof AtlasElement) {
value = objectNodeFromElement((AtlasElement) value, propertyKeys,
showTypes ? AtlasGraphSONMode.EXTENDED : AtlasGraphSONMode.NORMAL);
} else if (value.getClass().isArray()) {
value = createJSONList(convertArrayToList(value), propertyKeys, showTypes);
}
}
putObject(jsonMap, key.toString(), getValue(value, showTypes));
}
return jsonMap;
}
private static void addObject(final ArrayNode jsonList, final Object value) {
if (value == null) {
jsonList.add((JsonNode) null);
} else if (value.getClass() == Boolean.class) {
jsonList.add((Boolean) value);
} else if (value.getClass() == Long.class) {
jsonList.add((Long) value);
} else if (value.getClass() == Integer.class) {
jsonList.add((Integer) value);
} else if (value.getClass() == Float.class) {
jsonList.add((Float) value);
} else if (value.getClass() == Double.class) {
jsonList.add((Double) value);
} else if (value.getClass() == Byte.class) {
jsonList.add((Byte) value);
} else if (value.getClass() == Short.class) {
jsonList.add((Short) value);
} else if (value.getClass() == String.class) {
jsonList.add((String) value);
} else if (value instanceof ObjectNode) {
jsonList.add((ObjectNode) value);
} else if (value instanceof ArrayNode) {
jsonList.add((ArrayNode) value);
} else {
jsonList.add(value.toString());
}
}
private static void putObject(final ObjectNode jsonMap, final String key, final Object value) {
if (value == null) {
jsonMap.put(key, (JsonNode) null);
} else if (value.getClass() == Boolean.class) {
jsonMap.put(key, (Boolean) value);
} else if (value.getClass() == Long.class) {
jsonMap.put(key, (Long) value);
} else if (value.getClass() == Integer.class) {
jsonMap.put(key, (Integer) value);
} else if (value.getClass() == Float.class) {
jsonMap.put(key, (Float) value);
} else if (value.getClass() == Double.class) {
jsonMap.put(key, (Double) value);
} else if (value.getClass() == Short.class) {
jsonMap.put(key, (Short) value);
} else if (value.getClass() == Byte.class) {
jsonMap.put(key, (Byte) value);
} else if (value.getClass() == String.class) {
jsonMap.put(key, (String) value);
} else if (value instanceof ObjectNode) {
jsonMap.put(key, (ObjectNode) value);
} else if (value instanceof ArrayNode) {
jsonMap.put(key, (ArrayNode) value);
} else {
jsonMap.put(key, value.toString());
}
}
private static Map<String, Object> createPropertyMap(final AtlasElement element, final List<String> propertyKeys,
final ElementPropertiesRule rule, final boolean normalized) {
final Map<String, Object> map = new HashMap<String, Object>();
final List<String> propertyKeyList;
if (normalized) {
final List<String> sorted = new ArrayList<String>(element.getPropertyKeys());
Collections.sort(sorted);
propertyKeyList = sorted;
} else {
propertyKeyList = new ArrayList<String>(element.getPropertyKeys());
}
if (propertyKeys == null) {
for (String key : propertyKeyList) {
final Object valToPutInMap = element.getProperty(key, Object.class);
if (valToPutInMap != null) {
map.put(key, valToPutInMap);
}
}
} else {
if (rule == ElementPropertiesRule.INCLUDE) {
for (String key : propertyKeys) {
final Object valToPutInMap = element.getProperty(key, Object.class);
if (valToPutInMap != null) {
map.put(key, valToPutInMap);
}
}
} else {
for (String key : propertyKeyList) {
if (!propertyKeys.contains(key)) {
final Object valToPutInMap = element.getProperty(key, Object.class);
if (valToPutInMap != null) {
map.put(key, valToPutInMap);
}
}
}
}
}
return map;
}
private static Object getValue(Object value, final boolean includeType) {
Object returnValue = value;
// if the includeType is set to true then show the data types of the properties
if (includeType) {
// type will be one of: map, list, string, long, int, double, float.
// in the event of a complex object it will call a toString and store as a
// string
String type = determineType(value);
ObjectNode valueAndType = JSON_NODE_FACTORY.objectNode();
valueAndType.put(AtlasGraphSONTokens.TYPE, type);
if (type.equals(AtlasGraphSONTokens.TYPE_LIST)) {
// values of lists must be accumulated as ObjectNode objects under the value key.
// will return as a ArrayNode. called recursively to traverse the entire
// object graph of each item in the array.
ArrayNode list = (ArrayNode) value;
// there is a set of values that must be accumulated as an array under a key
ArrayNode valueArray = valueAndType.putArray(AtlasGraphSONTokens.VALUE);
for (int ix = 0; ix < list.size(); ix++) {
// the value of each item in the array is a node object from an ArrayNode...must
// get the value of it.
addObject(valueArray, getValue(getTypedValueFromJsonNode(list.get(ix)), includeType));
}
} else if (type.equals(AtlasGraphSONTokens.TYPE_MAP)) {
// maps are converted to a ObjectNode. called recursively to traverse
// the entire object graph within the map.
ObjectNode convertedMap = JSON_NODE_FACTORY.objectNode();
ObjectNode jsonObject = (ObjectNode) value;
Iterator<?> keyIterator = jsonObject.fieldNames();
while (keyIterator.hasNext()) {
Object key = keyIterator.next();
// no need to getValue() here as this is already a ObjectNode and should have type info
convertedMap.put(key.toString(), jsonObject.get(key.toString()));
}
valueAndType.put(AtlasGraphSONTokens.VALUE, convertedMap);
} else {
// this must be a primitive value or a complex object. if a complex
// object it will be handled by a call to toString and stored as a
// string value
putObject(valueAndType, AtlasGraphSONTokens.VALUE, value);
}
// this goes back as a JSONObject with data type and value
returnValue = valueAndType;
}
return returnValue;
}
private static Object getTypedValueFromJsonNode(JsonNode node) {
Object theValue = null;
if (node != null && !node.isNull()) {
if (node.isBoolean()) {
theValue = node.booleanValue();
} else if (node.isDouble()) {
theValue = node.doubleValue();
} else if (node.isFloatingPointNumber()) {
theValue = node.floatValue();
} else if (node.isInt()) {
theValue = node.intValue();
} else if (node.isLong()) {
theValue = node.longValue();
} else if (node.isTextual()) {
theValue = node.textValue();
} else if (node.isArray()) {
// this is an array so just send it back so that it can be
// reprocessed to its primitive components
theValue = node;
} else if (node.isObject()) {
// this is an object so just send it back so that it can be
// reprocessed to its primitive components
theValue = node;
} else {
theValue = node.textValue();
}
}
return theValue;
}
private static List<Object> convertArrayToList(final Object value) {
final ArrayList<Object> list = new ArrayList<Object>();
int arrlength = Array.getLength(value);
for (int i = 0; i < arrlength; i++) {
Object object = Array.get(value, i);
list.add(object);
}
return list;
}
private static String determineType(final Object value) {
String type = AtlasGraphSONTokens.TYPE_STRING;
if (value == null) {
type = AtlasGraphSONTokens.TYPE_UNKNOWN;
} else if (value.getClass() == Double.class) {
type = AtlasGraphSONTokens.TYPE_DOUBLE;
} else if (value.getClass() == Float.class) {
type = AtlasGraphSONTokens.TYPE_FLOAT;
} else if (value.getClass() == Byte.class) {
type = AtlasGraphSONTokens.TYPE_BYTE;
} else if (value.getClass() == Short.class) {
type = AtlasGraphSONTokens.TYPE_SHORT;
} else if (value.getClass() == Integer.class) {
type = AtlasGraphSONTokens.TYPE_INTEGER;
} else if (value.getClass() == Long.class) {
type = AtlasGraphSONTokens.TYPE_LONG;
} else if (value.getClass() == Boolean.class) {
type = AtlasGraphSONTokens.TYPE_BOOLEAN;
} else if (value instanceof ArrayNode) {
type = AtlasGraphSONTokens.TYPE_LIST;
} else if (value instanceof ObjectNode) {
type = AtlasGraphSONTokens.TYPE_MAP;
}
return type;
}
static class ElementFactory {
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/query/NativeTitan1GraphQuery.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.query;
import java.util.Collection;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery.ComparisionOperator;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.repository.graphdb.titan.query.NativeTitanGraphQuery;
import org.apache.atlas.repository.graphdb.titan1.Titan1Edge;
import org.apache.atlas.repository.graphdb.titan1.Titan1Graph;
import org.apache.atlas.repository.graphdb.titan1.Titan1GraphDatabase;
import org.apache.atlas.repository.graphdb.titan1.Titan1Vertex;
import org.apache.tinkerpop.gremlin.process.traversal.Compare;
import com.thinkaurelius.titan.core.TitanGraphQuery;
import com.thinkaurelius.titan.core.TitanVertex;
import com.thinkaurelius.titan.core.attribute.Contain;
import com.thinkaurelius.titan.graphdb.query.TitanPredicate;
/**
* Titan 1.0.0 implementation of NativeTitanGraphQuery.
*/
public class NativeTitan1GraphQuery implements NativeTitanGraphQuery<Titan1Vertex, Titan1Edge> {
private Titan1Graph graph;
private TitanGraphQuery<?> query;
public NativeTitan1GraphQuery(Titan1Graph graph) {
this.query = Titan1GraphDatabase.getGraphInstance().query();
this.graph = graph;
}
@Override
public Iterable<AtlasVertex<Titan1Vertex, Titan1Edge>> vertices() {
Iterable<TitanVertex> it = query.vertices();
return graph.wrapVertices(it);
}
@Override
public void in(String propertyName, Collection<? extends Object> values) {
query.has(propertyName, Contain.IN, values);
}
@Override
public void has(String propertyName, ComparisionOperator op, Object value) {
Compare c = getGremlinPredicate(op);
TitanPredicate pred = TitanPredicate.Converter.convert(c);
query.has(propertyName, pred, value);
}
private Compare getGremlinPredicate(ComparisionOperator op) {
switch (op) {
case EQUAL:
return Compare.eq;
case GREATER_THAN_EQUAL:
return Compare.gte;
case LESS_THAN_EQUAL:
return Compare.lte;
case NOT_EQUAL:
return Compare.neq;
default:
throw new RuntimeException("Unsupported comparison operator:" + op);
}
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/query/Titan1GraphQuery.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.query;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery;
import org.apache.atlas.repository.graphdb.titan.query.TitanGraphQuery;
import org.apache.atlas.repository.graphdb.titan.query.NativeTitanGraphQuery;
import org.apache.atlas.repository.graphdb.titan.query.NativeTitanQueryFactory;
import org.apache.atlas.repository.graphdb.titan1.Titan1Edge;
import org.apache.atlas.repository.graphdb.titan1.Titan1Graph;
import org.apache.atlas.repository.graphdb.titan1.Titan1Vertex;
/**
* Titan 1.0.0 implementation of TitanGraphQuery.
*/
public class Titan1GraphQuery extends TitanGraphQuery<Titan1Vertex, Titan1Edge>
implements NativeTitanQueryFactory<Titan1Vertex, Titan1Edge> {
public Titan1GraphQuery(Titan1Graph graph, boolean isChildQuery) {
super(graph, isChildQuery);
}
public Titan1GraphQuery(Titan1Graph graph) {
super(graph);
}
@Override
public AtlasGraphQuery<Titan1Vertex, Titan1Edge> createChildQuery() {
return new Titan1GraphQuery((Titan1Graph) graph, true);
}
@Override
protected NativeTitanQueryFactory<Titan1Vertex, Titan1Edge> getQueryFactory() {
return this;
}
@Override
public NativeTitanGraphQuery<Titan1Vertex, Titan1Edge> createNativeTitanQuery() {
return new NativeTitan1GraphQuery((Titan1Graph) graph);
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/serializer/BigDecimalSerializer.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.serializer;
import java.math.BigDecimal;
import java.math.BigInteger;
import com.thinkaurelius.titan.core.attribute.AttributeSerializer;
import com.thinkaurelius.titan.diskstorage.ScanBuffer;
import com.thinkaurelius.titan.diskstorage.WriteBuffer;
/**
* Serializer for BigDecimal values.
*/
public class BigDecimalSerializer implements AttributeSerializer<BigDecimal> {
private final BigIntegerSerializer bigIntegerDelegate = new BigIntegerSerializer();
@Override
public BigDecimal read(ScanBuffer buffer) {
BigInteger unscaledVal = bigIntegerDelegate.read(buffer);
int scale = buffer.getInt();
return new BigDecimal(unscaledVal, scale);
}
@Override
public void write(WriteBuffer buffer, BigDecimal attribute) {
BigInteger unscaledVal = attribute.unscaledValue();
int scale = attribute.scale();
bigIntegerDelegate.write(buffer, unscaledVal);
buffer.putInt(scale);
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/serializer/BigIntegerSerializer.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.serializer;
import java.math.BigInteger;
import com.thinkaurelius.titan.core.attribute.AttributeSerializer;
import com.thinkaurelius.titan.diskstorage.ScanBuffer;
import com.thinkaurelius.titan.diskstorage.WriteBuffer;
import com.thinkaurelius.titan.graphdb.database.serialize.attribute.ByteArraySerializer;
/**
* Serializer for BigInteger values.
*/
public class BigIntegerSerializer implements AttributeSerializer<BigInteger> {
private final ByteArraySerializer delegate = new ByteArraySerializer();
@Override
public BigInteger read(ScanBuffer buffer) {
byte[] value = delegate.read(buffer);
return new BigInteger(value);
}
@Override
public void write(WriteBuffer buffer, BigInteger attribute) {
byte[] value = attribute.toByteArray();
delegate.write(buffer, value);
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/serializer/StringListSerializer.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.serializer;
import java.util.ArrayList;
import java.util.List;
import com.thinkaurelius.titan.core.attribute.AttributeSerializer;
import com.thinkaurelius.titan.diskstorage.ScanBuffer;
import com.thinkaurelius.titan.diskstorage.WriteBuffer;
import com.thinkaurelius.titan.graphdb.database.idhandling.VariableLong;
import com.thinkaurelius.titan.graphdb.database.serialize.attribute.StringSerializer;
/**
* Serializer for String lists.
*/
public class StringListSerializer implements AttributeSerializer<List<String>> {
private final StringSerializer stringSerializer = new StringSerializer();
@Override
public List<String> read(ScanBuffer buffer) {
int length = (int)VariableLong.readPositive(buffer);
List<String> result = new ArrayList<String>(length);
for(int i = 0; i < length; i++) {
result.add(stringSerializer.read(buffer));
}
return result;
}
@Override
public void write(WriteBuffer buffer, List<String> attributes) {
VariableLong.writePositive(buffer, attributes.size());
for(String attr : attributes) {
stringSerializer.write(buffer, attr);
}
}
}
graphdb/titan1/src/main/java/org/apache/atlas/repository/graphdb/titan1/serializer/TypeCategorySerializer.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1.serializer;
import org.apache.atlas.typesystem.types.DataTypes.TypeCategory;
import com.thinkaurelius.titan.graphdb.database.serialize.attribute.EnumSerializer;
/**
* Serializer for TypeCategory value.
*/
public class TypeCategorySerializer extends EnumSerializer<TypeCategory> {
public TypeCategorySerializer() {
super(TypeCategory.class);
}
}
graphdb/titan1/src/main/resources/META-INF/services/javax.script.ScriptEngineFactory 0 → 100644
org.apache.tinkerpop.gremlin.groovy.jsr223.GremlinGroovyScriptEngineFactory
graphdb/titan1/src/test/java/org/apache/atlas/repository/graphdb/titan1/AbstractGraphDatabaseTest.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import java.util.ArrayList;
import java.util.Collections;
import java.util.List;
import org.apache.atlas.repository.Constants;
import org.apache.atlas.repository.graphdb.AtlasCardinality;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.repository.graphdb.AtlasGraphManagement;
import org.apache.atlas.repository.graphdb.AtlasPropertyKey;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.testng.annotations.AfterClass;
import org.testng.annotations.AfterMethod;
import org.testng.annotations.BeforeClass;
/**
*
*/
public abstract class AbstractGraphDatabaseTest {
protected static final String WEIGHT_PROPERTY = "weight";
protected static final String TRAIT_NAMES = Constants.TRAIT_NAMES_PROPERTY_KEY;
protected static final String TYPE_PROPERTY_NAME = "__type";
protected static final String TYPESYSTEM = "TYPESYSTEM";
private static final String BACKING_INDEX_NAME = "backing";
private AtlasGraph<?, ?> graph = null;
public AbstractGraphDatabaseTest() {
super();
}
@BeforeClass
public static void createIndices() {
Titan1GraphDatabase db = new Titan1GraphDatabase();
AtlasGraphManagement mgmt = db.getGraph().getManagementSystem();
if (mgmt.getGraphIndex(BACKING_INDEX_NAME) == null) {
mgmt.createVertexIndex(BACKING_INDEX_NAME, Constants.BACKING_INDEX,
Collections.<AtlasPropertyKey>emptyList());
}
mgmt.makePropertyKey("age13", Integer.class, AtlasCardinality.SINGLE);
createIndices(mgmt, "name", String.class, false, AtlasCardinality.SINGLE);
createIndices(mgmt, WEIGHT_PROPERTY, Integer.class, false, AtlasCardinality.SINGLE);
createIndices(mgmt, "size15", String.class, false, AtlasCardinality.SINGLE);
createIndices(mgmt, "typeName", String.class, false, AtlasCardinality.SINGLE);
createIndices(mgmt, "__type", String.class, false, AtlasCardinality.SINGLE);
createIndices(mgmt, Constants.GUID_PROPERTY_KEY, String.class, true, AtlasCardinality.SINGLE);
createIndices(mgmt, Constants.TRAIT_NAMES_PROPERTY_KEY, String.class, false, AtlasCardinality.SET);
createIndices(mgmt, Constants.SUPER_TYPES_PROPERTY_KEY, String.class, false, AtlasCardinality.SET);
mgmt.commit();
}
@AfterMethod
public void commitGraph() {
//force any pending actions to be committed so we can be sure they don't cause errors.
pushChangesAndFlushCache();
getGraph().commit();
}
@AfterClass
public static void cleanUp() {
Titan1Graph graph = new Titan1Graph();
graph.clear();
}
protected <V, E> void pushChangesAndFlushCache() {
getGraph().commit();
}
private static void createIndices(AtlasGraphManagement management, String propertyName, Class propertyClass,
boolean isUnique, AtlasCardinality cardinality) {
if (management.containsPropertyKey(propertyName)) {
//index was already created
return;
}
AtlasPropertyKey key = management.makePropertyKey(propertyName, propertyClass, cardinality);
try {
if (propertyClass != Integer.class) {
management.addVertexIndexKey(BACKING_INDEX_NAME, key);
}
} catch(Throwable t) {
//ok
t.printStackTrace();
}
try {
management.createExactMatchIndex(propertyName, isUnique, Collections.singletonList(key));
} catch(Throwable t) {
//ok
t.printStackTrace();
}
}
protected final <V, E> AtlasGraph<V, E> getGraph() {
if (graph == null) {
graph = new Titan1Graph();
}
return (AtlasGraph<V, E>)graph;
}
protected Titan1Graph getTitan1Graph() {
AtlasGraph g = getGraph();
return (Titan1Graph)g;
}
protected List<AtlasVertex> newVertices = new ArrayList<>();
protected final <V, E> AtlasVertex<V, E> createVertex(AtlasGraph<V, E> theGraph) {
AtlasVertex<V, E> vertex = theGraph.addVertex();
newVertices.add(vertex);
return vertex;
}
@AfterMethod
public void removeVertices() {
for(AtlasVertex vertex : newVertices) {
if (vertex.exists()) {
getGraph().removeVertex(vertex);
}
}
getGraph().commit();
newVertices.clear();
}
protected void runSynchronouslyInNewThread(final Runnable r) throws Throwable {
RunnableWrapper wrapper = new RunnableWrapper(r);
Thread th = new Thread(wrapper);
th.start();
th.join();
Throwable ex = wrapper.getExceptionThrown();
if (ex != null) {
throw ex;
}
}
private static final class RunnableWrapper implements Runnable {
private final Runnable r;
private Throwable exceptionThrown = null;
private RunnableWrapper(Runnable r) {
this.r = r;
}
@Override
public void run() {
try {
r.run();
} catch(Throwable e) {
exceptionThrown = e;
}
}
public Throwable getExceptionThrown() {
return exceptionThrown;
}
}
}
graphdb/titan1/src/test/java/org/apache/atlas/repository/graphdb/titan1/GraphQueryTest.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import static org.testng.AssertJUnit.assertEquals;
import static org.testng.AssertJUnit.assertTrue;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
import java.util.List;
import org.apache.atlas.AtlasException;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery.ComparisionOperator;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.testng.annotations.Test;
import com.google.common.base.Predicate;
import com.google.common.collect.Collections2;
/**
* Tests for Titan1GraphQuery.
*/
@Test
public class GraphQueryTest extends AbstractGraphDatabaseTest {
@Test
public <V, E> void testQueryThatCannotRunInMemory() throws AtlasException {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
AtlasVertex<V, E> v2 = createVertex(graph);
v2.setProperty("name", "Fred");
AtlasVertex<V, E> v3 = createVertex(graph);
v3.setProperty("size15", "15");
graph.commit();
AtlasVertex<V, E> v4 = createVertex(graph);
v4.setProperty("name", "Fred");
v4.setProperty("size15", "15");
AtlasGraphQuery q = graph.query();
q.has("name", ComparisionOperator.NOT_EQUAL, "George");
q.has("size15", "15");
graph.commit();
pause(); //pause to let the index get updated
assertQueryMatches(q, v1, v3, v4);
}
@Test
public void testCombinationOfAndsAndOrs() throws AtlasException {
Titan1Graph graph = getTitan1Graph();
AtlasVertex<Titan1Vertex, Titan1Edge> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
v1.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v2 = createVertex(graph);
v2.setProperty("name", "George");
v2.setProperty("size15", "16");
v2.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v3 = createVertex(graph);
v3.setProperty("name", "Jane");
v3.setProperty("size15", "17");
v3.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v4 = createVertex(graph);
v4.setProperty("name", "Bob");
v4.setProperty("size15", "18");
v4.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v5 = createVertex(graph);
v5.setProperty("name", "Julia");
v5.setProperty("size15", "19");
v5.setProperty("typeName", "Manager");
AtlasGraphQuery q = getGraphQuery();
q.has("typeName", "Person");
//initially match
AtlasGraphQuery inner1a = q.createChildQuery();
AtlasGraphQuery inner1b = q.createChildQuery();
inner1a.has("name", "Fred");
inner1b.has("name", "Jane");
q.or(toList(inner1a, inner1b));
AtlasGraphQuery inner2a = q.createChildQuery();
AtlasGraphQuery inner2b = q.createChildQuery();
AtlasGraphQuery inner2c = q.createChildQuery();
inner2a.has("size15", "18");
inner2b.has("size15", "15");
inner2c.has("size15", "16");
q.or(toList(inner2a, inner2b, inner2c));
assertQueryMatches(q, v1);
graph.commit();
pause(); //let the index update
assertQueryMatches(q, v1);
}
@Test
public void testWithinStep() throws AtlasException {
Titan1Graph graph = getTitan1Graph();
AtlasVertex<Titan1Vertex, Titan1Edge> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
v1.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v2 = createVertex(graph);
v2.setProperty("name", "George");
v2.setProperty("size15", "16");
v2.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v3 = createVertex(graph);
v3.setProperty("name", "Jane");
v3.setProperty("size15", "17");
v3.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v4 = createVertex(graph);
v4.setProperty("name", "Bob");
v4.setProperty("size15", "18");
v4.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v5 = createVertex(graph);
v5.setProperty("name", "Julia");
v5.setProperty("size15", "19");
v5.setProperty("typeName", "Manager");
AtlasGraphQuery q = getGraphQuery();
q.has("typeName", "Person");
//initially match
q.in("name", toList("Fred", "Jane"));
q.in("size15", toList("18", "15", "16"));
assertQueryMatches(q, v1);
graph.commit();
pause(); //let the index update
assertQueryMatches(q, v1);
}
@Test
public void testWithinStepWhereGraphIsStale() throws AtlasException {
Titan1Graph graph = getTitan1Graph();
AtlasVertex<Titan1Vertex, Titan1Edge> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
v1.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v2 = createVertex(graph);
v2.setProperty("name", "George");
v2.setProperty("size15", "16");
v2.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v3 = createVertex(graph);
v3.setProperty("name", "Jane");
v3.setProperty("size15", "17");
v3.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v4 = createVertex(graph);
v4.setProperty("name", "Bob");
v4.setProperty("size15", "18");
v4.setProperty("typeName", "Person");
AtlasVertex<Titan1Vertex, Titan1Edge> v5 = createVertex(graph);
v5.setProperty("name", "Julia");
v5.setProperty("size15", "19");
v5.setProperty("typeName", "Manager");
AtlasGraphQuery q = getGraphQuery();
q.has("typeName", "Person");
//initially match
q.in("name", toList("Fred", "Jane"));
graph.commit();
pause(); //let the index update
assertQueryMatches(q, v1, v3);
//make v3 no longer match the query. Within step should filter out the vertex since it no longer matches.
v3.setProperty("name", "Janet");
assertQueryMatches(q, v1);
}
@Test
public void testSimpleOrQuery() throws AtlasException {
Titan1Graph graph = getTitan1Graph();
AtlasVertex<Titan1Vertex, Titan1Edge> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
AtlasVertex<Titan1Vertex, Titan1Edge> v2 = createVertex(graph);
v2.setProperty("name", "Fred");
AtlasVertex<Titan1Vertex, Titan1Edge> v3 = createVertex(graph);
v3.setProperty("size15", "15");
graph.commit();
AtlasVertex<Titan1Vertex, Titan1Edge> v4 = createVertex(graph);
v4.setProperty("name", "Fred");
v4.setProperty("size15", "15");
AtlasVertex<Titan1Vertex, Titan1Edge> v5 = createVertex(graph);
v5.setProperty("name", "George");
v5.setProperty("size15", "16");
AtlasGraphQuery q = graph.query();
AtlasGraphQuery inner1 = q.createChildQuery().has("name", "Fred");
AtlasGraphQuery inner2 = q.createChildQuery().has("size15", "15");
q.or(toList(inner1, inner2));
assertQueryMatches(q, v1, v2, v3, v4);
graph.commit();
pause(); //pause to let the indexer get updated (this fails frequently without a pause)
assertQueryMatches(q, v1, v2, v3, v4);
}
@Test
public <V, E> void testQueryMatchesAddedVertices() throws AtlasException {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
AtlasVertex<V, E> v2 = createVertex(graph);
v2.setProperty("name", "Fred");
AtlasVertex<V, E> v3 = createVertex(graph);
v3.setProperty("size15", "15");
graph.commit();
AtlasVertex<V, E> v4 = createVertex(graph);
v4.setProperty("name", "Fred");
v4.setProperty("size15", "15");
AtlasGraphQuery q = getGraphQuery();
q.has("name", "Fred");
q.has("size15", "15");
assertQueryMatches(q, v1, v4);
graph.commit();
assertQueryMatches(q, v1, v4);
}
@Test
public <V, E> void testQueryDoesNotMatchRemovedVertices() throws AtlasException {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
AtlasVertex<V, E> v2 = createVertex(graph);
v2.setProperty("name", "Fred");
AtlasVertex<V, E> v3 = createVertex(graph);
v3.setProperty("size15", "15");
AtlasVertex<V, E> v4 = createVertex(graph);
v4.setProperty("name", "Fred");
v4.setProperty("size15", "15");
graph.commit();
graph.removeVertex(v1);
AtlasGraphQuery q = getGraphQuery();
q.has("name", "Fred");
q.has("size15", "15");
assertQueryMatches(q, v4);
graph.commit();
assertQueryMatches(q, v4);
}
@Test
public <V, E> void testQueryDoesNotMatchUncommittedAddedAndRemovedVertices() throws AtlasException {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
AtlasVertex<V, E> v2 = createVertex(graph);
v2.setProperty("name", "Fred");
AtlasVertex<V, E> v3 = createVertex(graph);
v3.setProperty("size15", "15");
AtlasVertex<V, E> v4 = createVertex(graph);
v4.setProperty("name", "Fred");
v4.setProperty("size15", "15");
AtlasGraphQuery q = getGraphQuery();
q.has("name", "Fred");
q.has("size15", "15");
assertQueryMatches(q, v1, v4);
graph.removeVertex(v1);
assertQueryMatches(q, v4);
graph.commit();
assertQueryMatches(q, v4);
}
@Test
public <V, E> void testQueryResultsReflectPropertyAdd() throws AtlasException {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> v1 = createVertex(graph);
v1.setProperty("name", "Fred");
v1.setProperty("size15", "15");
v1.addProperty(TRAIT_NAMES, "trait1");
v1.addProperty(TRAIT_NAMES, "trait2");
AtlasVertex<V, E> v2 = createVertex(graph);
v2.setProperty("name", "Fred");
v2.addProperty(TRAIT_NAMES, "trait1");
AtlasVertex<V, E> v3 = createVertex(graph);
v3.setProperty("size15", "15");
v3.addProperty(TRAIT_NAMES, "trait2");
AtlasGraphQuery query = getGraphQuery();
query.has("name", "Fred");
query.has(TRAIT_NAMES, "trait1");
query.has("size15", "15");
assertQueryMatches(query, v1);
//make v3 match the query
v3.setProperty("name", "Fred");
v3.addProperty(TRAIT_NAMES, "trait1");
assertQueryMatches(query, v1, v3);
v3.removeProperty(TRAIT_NAMES);
assertQueryMatches(query, v1);
v3.addProperty(TRAIT_NAMES, "trait2");
assertQueryMatches(query, v1);
v1.removeProperty(TRAIT_NAMES);
assertQueryMatches(query);
graph.commit();
assertQueryMatches(query);
}
private static <T> List<T> toList(Iterable<T> itr) {
List<T> result = new ArrayList<T>();
for(T object : itr) {
result.add(object);
}
return result;
}
private <V, E> void assertQueryMatches(AtlasGraphQuery expr, AtlasVertex... expectedResults) throws AtlasException {
//getGraph().commit();
Collection<AtlasVertex<Titan1Vertex, Titan1Edge>> temp = toList(expr.vertices());
//filter out vertices from previous test executions
Collection<AtlasVertex<Titan1Vertex, Titan1Edge>> result =
Collections2.filter(temp, new Predicate<AtlasVertex<Titan1Vertex, Titan1Edge>>() {
@Override
public boolean apply(AtlasVertex<Titan1Vertex, Titan1Edge> input) {
return newVertices.contains(input);
}
});
String errorMessage = "Expected/found result sizes differ. Expected: "
+ Arrays.asList(expectedResults).toString() +", found: " + result;
assertEquals(errorMessage, expectedResults.length, result.size());
for(AtlasVertex<V, E> v : expectedResults) {
assertTrue(result.contains(v));
}
}
private static List<Object> toList(Object...objects) {
return Arrays.asList(objects);
}
private AtlasGraphQuery<Titan1Vertex, Titan1Edge> getGraphQuery() {
return getTitan1Graph().query();
}
private void pause() {
try {
Thread.sleep(5000);
} catch(InterruptedException e) {
//ignore
}
}
}
graphdb/titan1/src/test/java/org/apache/atlas/repository/graphdb/titan1/Titan1DatabaseTest.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import static org.testng.Assert.assertEquals;
import static org.testng.Assert.assertFalse;
import static org.testng.Assert.assertNotNull;
import static org.testng.Assert.assertNull;
import static org.testng.Assert.assertTrue;
import static org.testng.Assert.fail;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.List;
import org.apache.atlas.AtlasException;
import org.apache.atlas.repository.Constants;
import org.apache.atlas.repository.graphdb.AtlasCardinality;
import org.apache.atlas.repository.graphdb.AtlasEdge;
import org.apache.atlas.repository.graphdb.AtlasEdgeDirection;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.repository.graphdb.AtlasGraphManagement;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery;
import org.apache.atlas.repository.graphdb.AtlasGraphQuery.ComparisionOperator;
import org.apache.atlas.repository.graphdb.AtlasPropertyKey;
import org.apache.atlas.repository.graphdb.AtlasVertex;
import org.apache.atlas.typesystem.types.DataTypes.TypeCategory;
import org.testng.annotations.AfterClass;
import org.testng.annotations.Test;
/**
* Sanity test of basic graph operations using the Titan 0.5.4 graphdb
* abstraction layer implementation.
*/
public class Titan1DatabaseTest {
private AtlasGraph<?, ?> atlasGraph;
private <V, E> AtlasGraph<V, E> getGraph() {
if (atlasGraph == null) {
Titan1GraphDatabase db = new Titan1GraphDatabase();
atlasGraph = db.getGraph();
AtlasGraphManagement mgmt = atlasGraph.getManagementSystem();
// create the index (which defines these properties as being mult
// many)
for (String propertyName : new String[]{"__superTypeNames", "__traitNames"}) {
AtlasPropertyKey propertyKey = mgmt.getPropertyKey(propertyName);
if (propertyKey == null) {
propertyKey = mgmt.makePropertyKey(propertyName, String.class, AtlasCardinality.SET);
mgmt.createExactMatchIndex(propertyName, false, Collections.singletonList(propertyKey));
}
}
mgmt.commit();
}
return (AtlasGraph<V, E>) atlasGraph;
}
@AfterClass
public void cleanup() {
atlasGraph.clear();
atlasGraph = null;
}
@Test
public <V, E> void testPropertyDataTypes() {
// primitives
AtlasGraph<V, E> graph = getGraph();
testProperty(graph, "booleanProperty", Boolean.TRUE);
testProperty(graph, "booleanProperty", Boolean.FALSE);
testProperty(graph, "booleanProperty", new Boolean(Boolean.TRUE));
testProperty(graph, "booleanProperty", new Boolean(Boolean.FALSE));
testProperty(graph, "byteProperty", Byte.MAX_VALUE);
testProperty(graph, "byteProperty", Byte.MIN_VALUE);
testProperty(graph, "byteProperty", new Byte(Byte.MAX_VALUE));
testProperty(graph, "byteProperty", new Byte(Byte.MIN_VALUE));
testProperty(graph, "shortProperty", Short.MAX_VALUE);
testProperty(graph, "shortProperty", Short.MIN_VALUE);
testProperty(graph, "shortProperty", new Short(Short.MAX_VALUE));
testProperty(graph, "shortProperty", new Short(Short.MIN_VALUE));
testProperty(graph, "intProperty", Integer.MAX_VALUE);
testProperty(graph, "intProperty", Integer.MIN_VALUE);
testProperty(graph, "intProperty", new Integer(Integer.MAX_VALUE));
testProperty(graph, "intProperty", new Integer(Integer.MIN_VALUE));
testProperty(graph, "longProperty", Long.MIN_VALUE);
testProperty(graph, "longProperty", Long.MAX_VALUE);
testProperty(graph, "longProperty", new Long(Long.MIN_VALUE));
testProperty(graph, "longProperty", new Long(Long.MAX_VALUE));
testProperty(graph, "doubleProperty", Double.MAX_VALUE);
testProperty(graph, "doubleProperty", Double.MIN_VALUE);
testProperty(graph, "doubleProperty", new Double(Double.MAX_VALUE));
testProperty(graph, "doubleProperty", new Double(Double.MIN_VALUE));
testProperty(graph, "floatProperty", Float.MAX_VALUE);
testProperty(graph, "floatProperty", Float.MIN_VALUE);
testProperty(graph, "floatProperty", new Float(Float.MAX_VALUE));
testProperty(graph, "floatProperty", new Float(Float.MIN_VALUE));
// enumerations - TypeCategory
testProperty(graph, "typeCategoryProperty", TypeCategory.CLASS);
// biginteger
testProperty(graph, "bigIntegerProperty",
new BigInteger(String.valueOf(Long.MAX_VALUE)).multiply(BigInteger.TEN));
// bigdecimal
BigDecimal bigDecimal = new BigDecimal(Double.MAX_VALUE);
testProperty(graph, "bigDecimalProperty", bigDecimal.multiply(bigDecimal));
}
private <V, E> void testProperty(AtlasGraph<V, E> graph, String name, Object value) {
AtlasVertex<V, E> vertex = graph.addVertex();
vertex.setProperty(name, value);
assertEquals(value, vertex.getProperty(name, value.getClass()));
AtlasVertex<V, E> loaded = graph.getVertex(vertex.getId().toString());
assertEquals(value, loaded.getProperty(name, value.getClass()));
}
@Test
public <V, E> void testMultiplicityOnePropertySupport() {
AtlasGraph<V, E> graph = (AtlasGraph<V, E>) getGraph();
AtlasVertex<V, E> vertex = graph.addVertex();
vertex.setProperty("name", "Jeff");
vertex.setProperty("location", "Littleton");
assertEquals("Jeff", vertex.getProperty("name", String.class));
assertEquals("Littleton", vertex.getProperty("location", String.class));
AtlasVertex<V, E> vertexCopy = graph.getVertex(vertex.getId().toString());
assertEquals("Jeff", vertexCopy.getProperty("name", String.class));
assertEquals("Littleton", vertexCopy.getProperty("location", String.class));
assertTrue(vertexCopy.getPropertyKeys().contains("name"));
assertTrue(vertexCopy.getPropertyKeys().contains("location"));
assertTrue(vertexCopy.getPropertyValues("name", String.class).contains("Jeff"));
assertTrue(vertexCopy.getPropertyValues("location", String.class).contains("Littleton"));
assertTrue(vertexCopy.getPropertyValues("test", String.class).isEmpty());
assertNull(vertexCopy.getProperty("test", String.class));
vertex.removeProperty("name");
assertFalse(vertex.getPropertyKeys().contains("name"));
assertNull(vertex.getProperty("name", String.class));
assertTrue(vertex.getPropertyValues("name", String.class).isEmpty());
vertexCopy = graph.getVertex(vertex.getId().toString());
assertFalse(vertexCopy.getPropertyKeys().contains("name"));
assertNull(vertexCopy.getProperty("name", String.class));
assertTrue(vertexCopy.getPropertyValues("name", String.class).isEmpty());
}
@Test
public <V, E> void testRemoveEdge() {
AtlasGraph<V, E> graph = (AtlasGraph<V, E>) getGraph();
AtlasVertex<V, E> v1 = graph.addVertex();
AtlasVertex<V, E> v2 = graph.addVertex();
AtlasEdge<V, E> edge = graph.addEdge(v1, v2, "knows");
// make sure the edge exists
AtlasEdge<V, E> edgeCopy = graph.getEdge(edge.getId().toString());
assertNotNull(edgeCopy);
assertEquals(edgeCopy, edge);
graph.removeEdge(edge);
edgeCopy = graph.getEdge(edge.getId().toString());
// should return null now, since edge was deleted
assertNull(edgeCopy);
}
@Test
public <V, E> void testRemoveVertex() {
AtlasGraph<V, E> graph = (AtlasGraph<V, E>) getGraph();
AtlasVertex<V, E> v1 = graph.addVertex();
assertNotNull(graph.getVertex(v1.getId().toString()));
graph.removeVertex(v1);
assertNull(graph.getVertex(v1.getId().toString()));
}
@Test
public <V, E> void testGetEdges() {
AtlasGraph<V, E> graph = (AtlasGraph<V, E>) getGraph();
AtlasVertex<V, E> v1 = graph.addVertex();
AtlasVertex<V, E> v2 = graph.addVertex();
AtlasVertex<V, E> v3 = graph.addVertex();
AtlasEdge<V, E> knows = graph.addEdge(v2, v1, "knows");
AtlasEdge<V, E> eats = graph.addEdge(v3, v1, "eats");
AtlasEdge<V, E> drives = graph.addEdge(v3, v2, "drives");
AtlasEdge<V, E> sleeps = graph.addEdge(v2, v3, "sleeps");
assertEdgesMatch(v1.getEdges(AtlasEdgeDirection.IN), knows, eats);
assertEdgesMatch(v1.getEdges(AtlasEdgeDirection.OUT));
assertEdgesMatch(v1.getEdges(AtlasEdgeDirection.BOTH), knows, eats);
assertEdgesMatch(v1.getEdges(AtlasEdgeDirection.IN, "knows"), knows);
assertEdgesMatch(v1.getEdges(AtlasEdgeDirection.OUT, "knows"));
assertEdgesMatch(v1.getEdges(AtlasEdgeDirection.BOTH, "knows"), knows);
assertEdgesMatch(v2.getEdges(AtlasEdgeDirection.IN), drives);
assertEdgesMatch(v2.getEdges(AtlasEdgeDirection.OUT), knows, sleeps);
assertEdgesMatch(v2.getEdges(AtlasEdgeDirection.BOTH), knows, sleeps, drives);
assertEdgesMatch(v2.getEdges(AtlasEdgeDirection.BOTH, "delivers"));
}
private <V, E> void assertEdgesMatch(Iterable<AtlasEdge<V, E>> edgesIt, AtlasEdge<V, E>... expected) {
List<AtlasEdge<V, E>> edges = toList(edgesIt);
assertEquals(expected.length, edges.size());
for (AtlasEdge<V, E> edge : expected) {
assertTrue(edges.contains(edge));
}
}
@Test
public <V, E> void testMultiplictyManyPropertySupport() {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> vertex = graph.addVertex();
String vertexId = vertex.getId().toString();
vertex.setProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait1");
vertex.setProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait2");
assertEquals(vertex.getPropertyValues(Constants.TRAIT_NAMES_PROPERTY_KEY, String.class).size(), 2);
vertex.addProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait3");
vertex.addProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait4");
assertTrue(vertex.getPropertyKeys().contains(Constants.TRAIT_NAMES_PROPERTY_KEY));
validateMultManyPropertiesInVertex(vertex);
// fetch a copy of the vertex, make sure result
// is the same
validateMultManyPropertiesInVertex(graph.getVertex(vertexId));
}
private <V, E> void validateMultManyPropertiesInVertex(AtlasVertex<V, E> vertex) {
assertTrue(vertex.getPropertyKeys().contains(Constants.TRAIT_NAMES_PROPERTY_KEY));
Collection<String> traitNames = vertex.getPropertyValues(Constants.TRAIT_NAMES_PROPERTY_KEY, String.class);
assertTrue(traitNames.contains("trait1"));
assertTrue(traitNames.contains("trait2"));
assertTrue(traitNames.contains("trait3"));
assertTrue(traitNames.contains("trait4"));
try {
vertex.getProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, String.class);
fail("Expected exception not thrown");
} catch (IllegalStateException expected) {
// multiple property values exist
}
}
@Test
public <V, E> void testListProperties() throws AtlasException {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> vertex = graph.addVertex();
List<String> colorsToSet = new ArrayList<String>();
colorsToSet.add("red");
colorsToSet.add("blue");
colorsToSet.add("green");
vertex.setListProperty("colors", colorsToSet);
List<String> colors = vertex.getListProperty("colors");
assertTrue(colors.contains("red"));
assertTrue(colors.contains("blue"));
assertTrue(colors.contains("green"));
AtlasVertex<V, E> vertexCopy = graph.getVertex(vertex.getId().toString());
colors = vertexCopy.getListProperty("colors");
assertTrue(colors.contains("red"));
assertTrue(colors.contains("blue"));
assertTrue(colors.contains("green"));
}
@Test
public <V, E> void testRemoveProperty() {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> vertex = graph.addVertex();
vertex.addProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait1");
vertex.addProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait1");
vertex.setProperty("name", "Jeff");
// remove existing property - multiplicity one
vertex.removeProperty("jeff");
assertFalse(vertex.getPropertyKeys().contains("jeff"));
// remove existing property - multiplicity many
vertex.removeProperty(Constants.TRAIT_NAMES_PROPERTY_KEY);
assertFalse(vertex.getPropertyKeys().contains(Constants.TRAIT_NAMES_PROPERTY_KEY));
AtlasVertex<V, E> vertexCopy = graph.getVertex(vertex.getId().toString());
assertFalse(vertexCopy.getPropertyKeys().contains("jeff"));
assertFalse(vertexCopy.getPropertyKeys().contains(Constants.TRAIT_NAMES_PROPERTY_KEY));
// remove non-existing property
vertex.removeProperty(Constants.TRAIT_NAMES_PROPERTY_KEY);
vertex.removeProperty("jeff");
}
@Test
public <V, E> void getGetGraphQueryForVertices() {
AtlasGraph<V, E> graph = getGraph();
AtlasVertex<V, E> v1 = graph.addVertex();
AtlasVertex<V, E> v2 = graph.addVertex();
AtlasVertex<V, E> v3 = graph.addVertex();
v1.setProperty("name", "Jeff");
v1.setProperty("weight", 1);
v2.setProperty("name", "Fred");
v2.setProperty("weight", 2);
v3.setProperty("name", "Chris");
v3.setProperty("weight", 3);
AtlasEdge<V, E> knows = graph.addEdge(v2, v1, "knows");
knows.setProperty("weight", 1);
AtlasEdge<V, E> eats = graph.addEdge(v3, v1, "eats");
eats.setProperty("weight", 2);
AtlasEdge<V, E> drives = graph.addEdge(v3, v2, "drives");
drives.setProperty("weight", 3);
AtlasEdge<V, E> sleeps = graph.addEdge(v2, v3, "sleeps");
sleeps.setProperty("weight", 4);
testExecuteGraphQuery("name", null, "Jeff", v1);
testExecuteGraphQuery("weight", ComparisionOperator.EQUAL, 2, v2);
testExecuteGraphQuery("weight", ComparisionOperator.GREATER_THAN_EQUAL, 2, v2, v3);
testExecuteGraphQuery("weight", ComparisionOperator.LESS_THAN_EQUAL, 2, v2, v1);
}
private <V, E> void testExecuteGraphQuery(String property, ComparisionOperator op, Object value,
AtlasVertex<V, E>... expected) {
AtlasGraph<V, E> graph = getGraph();
AtlasGraphQuery<V, E> query = graph.query();
if (op != null) {
query.has(property, op, value);
} else {
query.has(property, value);
}
Iterable<? extends AtlasVertex<V, E>> result = query.vertices();
List<AtlasVertex<V, E>> list = toList(result);
assertEquals(expected.length, list.size());
for (AtlasVertex<V, E> vertex : expected) {
assertTrue(list.contains(vertex));
}
}
@Test
public <V, E> void testAddMultManyPropertyValueTwice() {
AtlasGraph<V, E> graph = getGraph();
String vertexId;
AtlasVertex<V, E> vertex = graph.addVertex();
vertexId = vertex.getId().toString();
vertex.setProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait1");
vertex.setProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait1");
vertex.addProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait2");
vertex.addProperty(Constants.TRAIT_NAMES_PROPERTY_KEY, "trait2");
validateDuplicatePropertyVertex(vertex);
// fetch a copy of the vertex, make sure result is the same
validateDuplicatePropertyVertex(graph.getVertex(vertexId));
}
private <V, E> void validateDuplicatePropertyVertex(AtlasVertex<V, E> vertex) {
assertEquals(2, vertex.getPropertyValues(Constants.TRAIT_NAMES_PROPERTY_KEY, String.class).size());
assertTrue(vertex.getPropertyKeys().contains(Constants.TRAIT_NAMES_PROPERTY_KEY));
Collection<String> traitNames = vertex.getPropertyValues(Constants.TRAIT_NAMES_PROPERTY_KEY, String.class);
assertTrue(traitNames.contains("trait1"));
assertTrue(traitNames.contains("trait2"));
}
private static <T> List<T> toList(Iterable<? extends T> iterable) {
List<T> result = new ArrayList<T>();
for (T item : iterable) {
result.add(item);
}
return result;
}
}
graphdb/titan1/src/test/java/org/apache/atlas/repository/graphdb/titan1/TitanGraphProviderTest.java 0 → 100644
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.atlas.repository.graphdb.titan1;
import org.apache.atlas.ApplicationProperties;
import org.apache.atlas.AtlasException;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.commons.configuration.Configuration;
import org.testng.Assert;
import org.testng.annotations.AfterClass;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Test;
@Test
public class TitanGraphProviderTest {
private Configuration configuration;
private AtlasGraph<?, ?> graph;
@BeforeTest
public void setUp() throws AtlasException {
//First get Instance
graph = new Titan1Graph();
configuration = ApplicationProperties.getSubsetConfiguration(ApplicationProperties.get(),
Titan1GraphDatabase.GRAPH_PREFIX);
}
@AfterClass
public void tearDown() throws Exception {
try {
graph.shutdown();
} catch (Exception e) {
e.printStackTrace();
}
try {
graph.clear();
} catch (Exception e) {
e.printStackTrace();
}
}
@Test
public void testValidate() throws AtlasException {
try {
Titan1GraphDatabase.validateIndexBackend(configuration);
} catch (Exception e) {
Assert.fail("Unexpected exception ", e);
}
//Change backend
configuration.setProperty(Titan1GraphDatabase.INDEX_BACKEND_CONF, Titan1GraphDatabase.INDEX_BACKEND_LUCENE);
try {
Titan1GraphDatabase.validateIndexBackend(configuration);
Assert.fail("Expected exception");
} catch (Exception e) {
Assert.assertEquals(e.getMessage(),
"Configured Index Backend lucene differs from earlier configured "
+ "Index Backend elasticsearch. Aborting!");
}
}
}
graphdb/titan1/src/test/resources/atlas-application.properties 0 → 100644
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
######### Graph Database to Use #########
atlas.graphdb.backend=org.apache.atlas.repository.graphdb.titan1.Titan1Database
######### Atlas Server Configs #########
atlas.rest.address=http://localhost:31000
######### Graph Database Configs #########
# Graph Storage
atlas.graph.storage.backend=${titan.storage.backend}
# Graph Search Index Backend
atlas.graph.index.search.backend=${titan.index.backend}
#Berkeley storage directory
atlas.graph.storage.directory=${sys:atlas.data}/berkley
#hbase
#For standalone mode , specify localhost
#for distributed mode, specify zookeeper quorum here - For more information refer http://s3.thinkaurelius.com/docs/titan/current/hbase.html#_remote_server_mode_2
atlas.graph.storage.hostname=${titan.storage.hostname}
atlas.graph.storage.hbase.regions-per-server=1
atlas.graph.storage.lock.wait-time=10000
#ElasticSearch
atlas.graph.index.search.directory=${sys:atlas.data}/es
atlas.graph.index.search.elasticsearch.client-only=false
atlas.graph.index.search.elasticsearch.local-mode=true
atlas.graph.index.search.elasticsearch.create.sleep=2000
# Solr cloud mode properties
atlas.graph.index.search.solr.mode=cloud
atlas.graph.index.search.solr.zookeeper-url=${solr.zk.address}
######### Hive Lineage Configs #########
# This models reflects the base super types for Data and Process
#atlas.lineage.hive.table.type.name=DataSet
#atlas.lineage.hive.process.type.name=Process
#atlas.lineage.hive.process.inputs.name=inputs
#atlas.lineage.hive.process.outputs.name=outputs
## Schema
atlas.lineage.hive.table.schema.query.hive_table=hive_table where name='%s'\, columns
######### Notification Configs #########
atlas.notification.embedded=true
atlas.kafka.zookeeper.connect=localhost:19026
atlas.kafka.bootstrap.servers=localhost:19027
atlas.kafka.data=${sys:atlas.data}/kafka
atlas.kafka.zookeeper.session.timeout.ms=4000
atlas.kafka.zookeeper.sync.time.ms=20
atlas.kafka.consumer.timeout.ms=100
atlas.kafka.auto.commit.interval.ms=100
atlas.kafka.hook.group.id=atlas
atlas.kafka.entities.group.id=atlas_entities
######### Entity Audit Configs #########
atlas.audit.hbase.tablename=ATLAS_ENTITY_AUDIT_EVENTS
atlas.audit.zookeeper.session.timeout.ms=1000
atlas.audit.hbase.zookeeper.quorum=localhost
atlas.audit.hbase.zookeeper.property.clientPort=19026
######### Security Properties #########
# SSL config
atlas.enableTLS=false
atlas.server.https.port=31443
######### Security Properties #########
hbase.security.authentication=simple
atlas.hook.falcon.synchronous=true
######### High Availability Configuration ########
atlas.server.ha.enabled=false
#atlas.server.ids=id1
#atlas.server.address.id1=localhost:21000
pom.xml
......@@ -533,6 +533,28 @@
<skipDocs>false</skipDocs>
</properties>
</profile>
<profile>
<id>titan1</id>
<properties>
<graphdb.backend.impl>org.apache.atlas.repository.graphdb.titan1.Titan1GraphDatabase</graphdb.backend.impl>
</properties>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-impls</artifactId>
<version>${project.version}</version>
<type>pom</type>
<exclusions>
<exclusion>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-titan0</artifactId>
</exclusion>
</exclusions>
</dependency>
</dependencies>
</dependencyManagement>
</profile>
</profiles>
<modules>
......@@ -1251,8 +1273,13 @@
<artifactId>atlas-graphdb-impls</artifactId>
<version>${project.version}</version>
<type>pom</type>
<!-- exclusions should be added here for all of the non-titan0 implementations -->
<scope>test</scope>
<!-- exclusions for all of the non-titan0 implementations -->
<exclusions>
<exclusion>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-titan1</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
......
release-log.txt
......@@ -9,6 +9,7 @@ ATLAS-1060 Add composite indexes for exact match performance improvements for al
ATLAS-1127 Modify creation and modification timestamps to Date instead of Long(sumasai)
ALL CHANGES:
ATLAS-695: Add Titan 1.0.0 support to Atlas (guptaneeru via jnhagelberg)
ATLAS-1552: automatic update of inverse references in V2 code path (dkantor)
ATLAS-1603: fix to handle null value for object_id type attributes (mneethiraj via kevalbhatt)
ATLAS 1607: notify listeners on classification addition/deletion (sarathkumarsubramanian via mneethiraj)
......
repository/src/test/java/org/apache/atlas/TestUtils.java
......@@ -53,6 +53,7 @@ import org.apache.atlas.repository.graph.GraphBackedMetadataRepository;
import org.apache.atlas.repository.graph.GraphBackedSearchIndexer;
import org.apache.atlas.repository.graph.GraphHelper;
import org.apache.atlas.repository.graphdb.AtlasGraph;
import org.apache.atlas.repository.graphdb.GremlinVersion;
import org.apache.atlas.repository.typestore.GraphBackedTypeStore;
import org.apache.atlas.repository.typestore.ITypeStore;
import org.apache.atlas.services.DefaultMetadataService;
......@@ -85,6 +86,7 @@ import org.apache.commons.configuration.Configuration;
import org.apache.commons.lang.RandomStringUtils;
import org.codehaus.jettison.json.JSONArray;
import org.testng.Assert;
import org.testng.SkipException;
import com.google.common.collect.ImmutableList;
import com.google.common.collect.ImmutableSet;
......@@ -778,4 +780,12 @@ public final class TestUtils {
checker.removeAll(actual);
assertEquals(checker.size(), 0);
}
public static void skipForGremlin3EnabledGraphDb() throws SkipException {
//ATLAS-1579 Currently, some tests are skipped for titan1 backened. As these tests are hard coded to use Gremlin2. See ATLAS-1579, ATLAS-1591 once it is fixed, please remove it.
if (TestUtils.getGraph().getSupportedGremlinVersion() == GremlinVersion.THREE) {
throw new SkipException ("This test requires Gremlin2. Skipping test ");
}
}
}
repository/src/test/java/org/apache/atlas/discovery/GraphBackedDiscoveryServiceTest.java
......@@ -49,6 +49,7 @@ import org.apache.atlas.repository.Constants;
import org.apache.atlas.repository.MetadataRepository;
import org.apache.atlas.repository.graph.AtlasGraphProvider;
import org.apache.atlas.repository.graph.GraphBackedSearchIndexer;
import org.apache.atlas.repository.graphdb.GremlinVersion;
import org.apache.atlas.type.AtlasTypeRegistry;
import org.apache.atlas.typesystem.ITypedReferenceableInstance;
import org.apache.atlas.typesystem.Referenceable;
......@@ -63,6 +64,7 @@ import org.codehaus.jettison.json.JSONArray;
import org.codehaus.jettison.json.JSONException;
import org.codehaus.jettison.json.JSONObject;
import org.testng.Assert;
import org.testng.SkipException;
import org.testng.annotations.AfterClass;
import org.testng.annotations.BeforeClass;
import org.testng.annotations.BeforeMethod;
......@@ -275,6 +277,7 @@ public class GraphBackedDiscoveryServiceTest extends BaseRepositoryTest {
@Test
public void testRawSearch1() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
// Query for all Vertices in Graph
Object r = discoveryService.searchByGremlin("g.V.toList()");
Assert.assertTrue(r instanceof List);
......@@ -398,7 +401,7 @@ public class GraphBackedDiscoveryServiceTest extends BaseRepositoryTest {
{"hive_db has name", 3},
{"hive_db, hive_table", 10},
{"View is JdbcAccess", 2},
{"hive_db as db1, hive_table where db1.name = \"Reporting\"", 0}, //Not working - ATLAS-145
{"hive_db as db1, hive_table where db1.name = \"Reporting\"", isGremlin3() ? 4 : 0}, //Not working in with Titan 0 - ATLAS-145
// - Final working query -> discoveryService.searchByGremlin("L:{_var_0 = [] as Set;g.V().has(\"__typeName\", \"hive_db\").fill(_var_0);g.V().has(\"__superTypeNames\", \"hive_db\").fill(_var_0);_var_0._().as(\"db1\").in(\"__hive_table.db\").back(\"db1\").and(_().has(\"hive_db.name\", T.eq, \"Reporting\")).toList()}")
/*
{"hive_db, hive_process has name"}, //Invalid query
......@@ -419,7 +422,7 @@ public class GraphBackedDiscoveryServiceTest extends BaseRepositoryTest {
{"hive_db where hive_db is JdbcAccess", 0}, //Not supposed to work
{"hive_db hive_table", 10},
{"hive_db where hive_db has name", 3},
{"hive_db as db1 hive_table where (db1.name = \"Reporting\")", 0}, //Not working -> ATLAS-145
{"hive_db as db1 hive_table where (db1.name = \"Reporting\")", isGremlin3() ? 4 : 0}, //Not working in Titan 0 -> ATLAS-145
{"hive_db where (name = \"Reporting\") select name as _col_0, (createTime + 1) as _col_1 ", 1},
{"hive_table where (name = \"sales_fact\" and createTime > \"2014-01-01\" ) select name as _col_0, createTime as _col_1 ", 1},
{"hive_table where (name = \"sales_fact\" and createTime >= \"2014-12-11T02:35:58.440Z\" ) select name as _col_0, createTime as _col_1 ", 1},
......@@ -528,7 +531,7 @@ public class GraphBackedDiscoveryServiceTest extends BaseRepositoryTest {
{"View is JdbcAccess", 2},
{"View is JdbcAccess limit 1", 1},
{"View is JdbcAccess limit 2 offset 1", 1},
{"hive_db as db1, hive_table where db1.name = \"Reporting\"", 0}, //Not working - ATLAS-145
{"hive_db as db1, hive_table where db1.name = \"Reporting\"", isGremlin3() ? 4 : 0}, //Not working in Titan 0 - ATLAS-145
{"from hive_table", 10},
......@@ -586,7 +589,7 @@ public class GraphBackedDiscoveryServiceTest extends BaseRepositoryTest {
{"hive_db where hive_db has name limit 2 offset 0", 2},
{"hive_db where hive_db has name limit 2 offset 1", 2},
{"hive_db as db1 hive_table where (db1.name = \"Reporting\")", 0}, //Not working -> ATLAS-145
{"hive_db as db1 hive_table where (db1.name = \"Reporting\")", isGremlin3() ? 4 : 0}, //Not working in Titan 0 -> ATLAS-145
{"hive_db where (name = \"Reporting\") select name as _col_0, (createTime + 1) as _col_1 ", 1},
{"hive_db where (name = \"Reporting\") select name as _col_0, (createTime + 1) as _col_1 limit 10", 1},
{"hive_db where (name = \"Reporting\") select name as _col_0, (createTime + 1) as _col_1 limit 10 offset 1", 0},
......@@ -1252,4 +1255,8 @@ public class GraphBackedDiscoveryServiceTest extends BaseRepositoryTest {
private FieldValueValidator makeNoResultsValidator() {
return new FieldValueValidator();
}
private boolean isGremlin3() {
return TestUtils.getGraph().getSupportedGremlinVersion() == GremlinVersion.THREE;
}
}
\ No newline at end of file
repository/src/test/java/org/apache/atlas/lineage/EntityLineageServiceTest.java
......@@ -18,18 +18,30 @@
package org.apache.atlas.lineage;
import com.google.common.collect.ImmutableList;
import static org.testng.Assert.assertEquals;
import static org.testng.Assert.assertNotNull;
import static org.testng.Assert.assertTrue;
import static org.testng.Assert.fail;
import java.util.Arrays;
import java.util.List;
import java.util.Map;
import java.util.Set;
import javax.inject.Inject;
import org.apache.atlas.AtlasClient;
import org.apache.atlas.AtlasErrorCode;
import org.apache.atlas.BaseRepositoryTest;
import org.apache.atlas.RepositoryMetadataModule;
import org.apache.atlas.TestUtils;
import org.apache.atlas.discovery.EntityLineageService;
import org.apache.atlas.exception.AtlasBaseException;
import org.apache.atlas.model.instance.AtlasEntity.Status;
import org.apache.atlas.model.instance.AtlasEntityHeader;
import org.apache.atlas.model.lineage.AtlasLineageInfo;
import org.apache.atlas.model.lineage.AtlasLineageInfo.LineageRelation;
import org.apache.atlas.model.lineage.AtlasLineageInfo.LineageDirection;
import org.apache.atlas.model.lineage.AtlasLineageInfo.LineageRelation;
import org.apache.atlas.typesystem.Referenceable;
import org.apache.atlas.typesystem.persistence.Id;
import org.apache.commons.collections.ArrayStack;
......@@ -37,17 +49,12 @@ import org.apache.commons.lang.RandomStringUtils;
import org.testng.Assert;
import org.testng.annotations.AfterClass;
import org.testng.annotations.BeforeClass;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.DataProvider;
import org.testng.annotations.Guice;
import org.testng.annotations.Test;
import javax.inject.Inject;
import java.util.Arrays;
import java.util.List;
import java.util.Map;
import java.util.Set;
import static org.testng.Assert.*;
import com.google.common.collect.ImmutableList;
/**
* Unit tests for the new v2 Instance LineageService.
......@@ -73,6 +80,7 @@ public class EntityLineageServiceTest extends BaseRepositoryTest {
*/
@Test
public void testCircularLineage() throws Exception{
TestUtils.skipForGremlin3EnabledGraphDb();
String entityGuid = getEntityId(HIVE_TABLE_TYPE, "name", "table2");
AtlasLineageInfo circularLineage = getInputLineageInfo(entityGuid, 5);
......@@ -108,6 +116,7 @@ public class EntityLineageServiceTest extends BaseRepositoryTest {
@Test
public void testGetInputLineageInfo() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
String entityGuid = getEntityId(HIVE_TABLE_TYPE, "name", "sales_fact_monthly_mv");
AtlasLineageInfo inputLineage = getInputLineageInfo(entityGuid, 4);
......@@ -143,6 +152,7 @@ public class EntityLineageServiceTest extends BaseRepositoryTest {
@Test
public void testGetOutputLineageInfo() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
String entityGuid = getEntityId(HIVE_TABLE_TYPE, "name", "sales_fact");
AtlasLineageInfo outputLineage = getOutputLineageInfo(entityGuid, 4);
......@@ -178,6 +188,7 @@ public class EntityLineageServiceTest extends BaseRepositoryTest {
@Test
public void testGetLineageInfo() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
String entityGuid = getEntityId(HIVE_TABLE_TYPE, "name", "sales_fact_monthly_mv");
AtlasLineageInfo bothLineage = getBothLineageInfo(entityGuid, 5);
......@@ -241,6 +252,7 @@ public class EntityLineageServiceTest extends BaseRepositoryTest {
@Test
public void testNewLineageWithDelete() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
String tableName = "table" + random();
createTable(tableName, 3, true);
String entityGuid = getEntityId(HIVE_TABLE_TYPE, "name", tableName);
......@@ -344,4 +356,5 @@ public class EntityLineageServiceTest extends BaseRepositoryTest {
private String getEntityId(String typeName, String attributeName, String attributeValue) throws Exception {
return repository.getEntityDefinition(typeName, attributeName, attributeValue).getId()._getId();
}
}
repository/src/test/java/org/apache/atlas/repository/audit/AuditRepositoryTestBase.java
......@@ -19,6 +19,7 @@
package org.apache.atlas.repository.audit;
import org.apache.atlas.EntityAuditEvent;
import org.apache.atlas.TestUtils;
import org.apache.atlas.typesystem.Referenceable;
import org.apache.commons.lang.RandomStringUtils;
import org.testng.annotations.BeforeTest;
......@@ -44,6 +45,7 @@ public class AuditRepositoryTestBase {
@Test
public void testAddEvents() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
EntityAuditEvent event = new EntityAuditEvent(rand(), System.currentTimeMillis(), "u1",
EntityAuditEvent.EntityAuditAction.ENTITY_CREATE, "d1", new Referenceable(rand()));
......@@ -57,6 +59,7 @@ public class AuditRepositoryTestBase {
@Test
public void testListPagination() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
String id1 = "id1" + rand();
String id2 = "id2" + rand();
String id3 = "id3" + rand();
......@@ -90,6 +93,7 @@ public class AuditRepositoryTestBase {
@Test
public void testInvalidEntityId() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
List<EntityAuditEvent> events = eventRepository.listEvents(rand(), null, (short) 3);
assertEquals(events.size(), 0);
}
......
repository/src/test/java/org/apache/atlas/repository/audit/HBaseBasedAuditRepositoryTest.java
......@@ -20,6 +20,7 @@ package org.apache.atlas.repository.audit;
import org.apache.atlas.ApplicationProperties;
import org.apache.atlas.EntityAuditEvent;
import org.apache.atlas.TestUtils;
import org.apache.commons.configuration.Configuration;
import org.apache.hadoop.hbase.TableName;
import org.apache.hadoop.hbase.client.Admin;
......@@ -36,6 +37,9 @@ public class HBaseBasedAuditRepositoryTest extends AuditRepositoryTestBase {
@BeforeClass
public void setup() throws Exception {
//ATLAS-1591 Currently, some tests are skipped for titan1 backened. As these tests are hard coded to use Gremlin2. See ATLAS-1591 once it is fixed, please remove it.
TestUtils.skipForGremlin3EnabledGraphDb();
eventRepository = new HBaseBasedAuditRepository();
HBaseTestUtils.startCluster();
((HBaseBasedAuditRepository) eventRepository).start();
......@@ -54,6 +58,7 @@ public class HBaseBasedAuditRepositoryTest extends AuditRepositoryTestBase {
@Test
public void testTableCreated() throws Exception {
TestUtils.skipForGremlin3EnabledGraphDb();
Connection connection = HBaseTestUtils.getConnection();
Admin admin = connection.getAdmin();
assertTrue(admin.tableExists(tableName));
......
webapp/pom.xml
......@@ -34,8 +34,8 @@
<properties>
<projectBaseDir>${project.basedir}/..</projectBaseDir>
<debug.jetty.daemon>true</debug.jetty.daemon>
<log4j.configuration.url>file:///${project.build.directory}/../../distro/src/conf/atlas-log4j.xml</log4j.configuration.url>
<packages.to.exclude />
<log4j.configuration.url>file://${project.build.directory}/../../distro/src/conf/atlas-log4j.xml</log4j.configuration.url>
</properties>
<profiles>
......@@ -46,7 +46,7 @@
<activeByDefault>false</activeByDefault>
</activation>
<properties>
<packages.to.exclude>WEB-INF/lib/titan-berkeleyje-${titan.version}.jar,WEB-INF/lib/je-*.jar,WEB-INF/lib/titan-es-${titan.version}.jar,WEB-INF/lib/elasticsearch-*.jar</packages.to.exclude>
<packages.to.exclude>WEB-INF/lib/titan-*.jar,WEB-INF/lib/je-*.jar,WEB-INF/lib/elasticsearch-*.jar,WEB-INF/lib/lucene-*.jar</packages.to.exclude>
</properties>
</profile>
......@@ -59,7 +59,6 @@
<packages.to.exclude>WEB-INF/lib/je-*.jar</packages.to.exclude>
</properties>
</profile>
<profile>
<id>Windows</id>
<activation>
......@@ -71,6 +70,45 @@
<log4j.configuration.url>file:/${project.build.directory}/../../distro/src/conf/atlas-log4j.xml</log4j.configuration.url>
</properties>
</profile>
<profile>
<id>titan1</id>
<!-- remove conflicting lucene/titan versions from catalog when using titan 1 -->
<dependencyManagement>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-catalog</artifactId>
<version>${project.version}</version>
<exclusions>
<exclusion>
<groupId>com.thinkaurelius.titan</groupId>
<artifactId>titan-core</artifactId>
</exclusion>
<exclusion>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-core</artifactId>
</exclusion>
<exclusion>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-queryparser</artifactId>
</exclusion>
<exclusion>
<groupId>org.apache.lucene</groupId>
<artifactId>lucene-analyzers-common</artifactId>
</exclusion>
</exclusions>
</dependency>
</dependencies>
</dependencyManagement>
<dependencies>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-catalog</artifactId>
<scope>provided</scope>
</dependency>
</dependencies>
</profile>
</profiles>
<dependencies>
......@@ -79,7 +117,6 @@
<artifactId>atlas-graphdb-impls</artifactId>
<type>pom</type>
</dependency>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-common</artifactId>
......@@ -110,17 +147,16 @@
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-notification</artifactId>
</dependency>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-intg</artifactId>
</dependency>
<dependency>
<groupId>org.apache.hadoop</groupId>
<artifactId>hadoop-common</artifactId>
</dependency>
<dependency>
<groupId>org.apache.hadoop</groupId>
<artifactId>hadoop-minikdc</artifactId>
......@@ -136,6 +172,11 @@
<artifactId>atlas-catalog</artifactId>
</dependency>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-graphdb-impls</artifactId>
<type>pom</type>
</dependency>
<!-- Zookeeper, curator -->
<dependency>
<groupId>org.apache.curator</groupId>
......@@ -155,8 +196,9 @@
<dependency>
<groupId>org.apache.zookeeper</groupId>
<artifactId>zookeeper</artifactId>
</dependency>
</dependency>
<!-- supports simple auth handler -->
<dependency>
<groupId>org.apache.httpcomponents</groupId>
......@@ -315,11 +357,6 @@
<version>${spring.security.version}</version>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
<version>${javax.servlet.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.ldap</groupId>
<artifactId>spring-ldap-core</artifactId>
<version>${spring-ldap-core.version}</version>
......@@ -330,6 +367,11 @@
<type>war</type>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
<version>${javax.servlet.version}</version>
</dependency>
<dependency>
<groupId>org.easymock</groupId>
<artifactId>easymock</artifactId>
<version>3.4</version>
......@@ -342,14 +384,12 @@
<classifier>tests</classifier>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.apache.atlas</groupId>
<artifactId>atlas-intg</artifactId>
<classifier>tests</classifier>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.nimbusds</groupId>
<artifactId>nimbus-jose-jwt</artifactId>
......@@ -448,7 +488,7 @@
<user.dir>${project.basedir}</user.dir>
<projectBaseDir>${project.basedir}/..</projectBaseDir>
</systemProperties>
<!--<skipTests>true</skipTests>-->
<!--<skipTests>true</skipTests> -->
<forkMode>always</forkMode>
<redirectTestOutputToFile>true</redirectTestOutputToFile>
<argLine>-Djava.awt.headless=true -Dproject.version=${project.version}
......@@ -494,8 +534,7 @@
<webApp>
<contextPath>/</contextPath>
<descriptor>${project.basedir}/src/test/webapp/WEB-INF/web.xml</descriptor>
<!-- ${project.build.directory}/atlas-webapp-${project.version} -->
<extraClasspath>${project.build.directory}/../../webapp/target/test-classes/</extraClasspath>
<extraClasspath>${project.build.testOutputDirectory}</extraClasspath>
</webApp>
<useTestScope>true</useTestScope>
<systemProperties>
......@@ -512,13 +551,17 @@
<value>${project.build.directory}/logs</value>
</systemProperty>
<systemProperty>
<name>atlas.graphdb.backend</name>
<value>${graphdb.backend.impl}</value>
</systemProperty>
<systemProperty>
<name>keystore.file</name>
<value>${project.build.directory}/../../webapp/target/atlas.keystore
<value>${project.build.directory}/atlas.keystore
</value>
</systemProperty>
<systemProperty>
<name>truststore.file</name>
<value>${project.build.directory}/../../webapp/target/atlas.keystore</value>
<value>${project.build.directory}/atlas.keystore</value>
</systemProperty>
<systemProperty>
<name>atlas.home</name>
......@@ -529,6 +572,10 @@
<value>${project.build.directory}/data</value>
</systemProperty>
<systemProperty>
<name>atlas.graphdb.backend</name>
<value>${graphdb.backend.impl}</value>
</systemProperty>
<systemProperty>
<key>atlas.conf</key>
<value>${project.build.directory}/../../typesystem/target/test-classes</value>
</systemProperty>
......@@ -537,26 +584,9 @@
<stopPort>31001</stopPort>
<stopWait>${jetty-maven-plugin.stopWait}</stopWait>
<daemon>${debug.jetty.daemon}</daemon>
<testClassesDirectory>${project.build.directory}/../../webapp/target/test-classes/</testClassesDirectory>
<testClassesDirectory>${project.build.testOutputDirectory}</testClassesDirectory>
<useTestClasspath>true</useTestClasspath>
</configuration>
<dependencies>
<dependency>
<groupId>org.eclipse.jetty</groupId>
<artifactId>jetty-jsp</artifactId>
<version>${jetty.version}</version>
<exclusions>
<exclusion>
<groupId>javax.servlet</groupId>
<artifactId>*</artifactId>
</exclusion>
<exclusion>
<groupId>org.glassfish</groupId>
<artifactId>javax.el</artifactId>
</exclusion>
</exclusions>
</dependency>
</dependencies>
<executions>
<execution>
<id>start-jetty</id>
......@@ -655,4 +685,6 @@
</plugin>
</plugins>
</build>
</project>
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