Skip to content
Projects
Groups
Snippets
Help
This project
Loading...
Sign in / Register
Toggle navigation
A
atlas
Project
Overview
Details
Activity
Cycle Analytics
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Charts
Issues
0
Issues
0
List
Board
Labels
Milestones
Merge Requests
0
Merge Requests
0
CI / CD
CI / CD
Pipelines
Jobs
Schedules
Charts
Wiki
Wiki
Snippets
Snippets
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Charts
Create a new issue
Jobs
Commits
Issue Boards
Open sidebar
dataplatform
atlas
Commits
a46711c5
Commit
a46711c5
authored
Jan 18, 2016
by
Shwetha GS
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
ATLAS-370 Implement deleteEntities at repository level (dkantor via shwethags)
parent
c4eebe0e
Hide whitespace changes
Inline
Side-by-side
Showing
7 changed files
with
375 additions
and
21 deletions
+375
-21
.gitignore
.gitignore
+3
-0
release-log.txt
release-log.txt
+1
-0
MetadataRepository.java
.../java/org/apache/atlas/repository/MetadataRepository.java
+6
-4
GraphBackedMetadataRepository.java
...atlas/repository/graph/GraphBackedMetadataRepository.java
+38
-1
GraphHelper.java
...n/java/org/apache/atlas/repository/graph/GraphHelper.java
+37
-3
TypedInstanceToGraphMapper.java
...he/atlas/repository/graph/TypedInstanceToGraphMapper.java
+101
-13
GraphBackedMetadataRepositoryDeleteEntitiesTest.java
...raph/GraphBackedMetadataRepositoryDeleteEntitiesTest.java
+189
-0
No files found.
.gitignore
View file @
a46711c5
...
@@ -39,6 +39,9 @@ test-output
...
@@ -39,6 +39,9 @@ test-output
#Python
#Python
*.pyc
*.pyc
# review board
.reviewboardrc
# other files
# other files
.DS_Store
.DS_Store
*.swp
*.swp
release-log.txt
View file @
a46711c5
...
@@ -6,6 +6,7 @@ INCOMPATIBLE CHANGES:
...
@@ -6,6 +6,7 @@ INCOMPATIBLE CHANGES:
ATLAS-379 Create sqoop and falcon metadata addons (venkatnrangan,bvellanki,sowmyaramesh via shwethags)
ATLAS-379 Create sqoop and falcon metadata addons (venkatnrangan,bvellanki,sowmyaramesh via shwethags)
ALL CHANGES:
ALL CHANGES:
ATLAS-370 Implement deleteEntities at repository level (dkantor via shwethags)
ATLAS-406 Resizing lineage window – should be an anchor on a corner – like ppt for graphic (sanjayp via shwethags)
ATLAS-406 Resizing lineage window – should be an anchor on a corner – like ppt for graphic (sanjayp via shwethags)
ATLAS-432 QuickStart lineage is broken (yhemanth via shwethags)
ATLAS-432 QuickStart lineage is broken (yhemanth via shwethags)
ATLAS-421 typo in Architecture.twiki (dbist13 via shwethags)
ATLAS-421 typo in Architecture.twiki (dbist13 via shwethags)
...
...
repository/src/main/java/org/apache/atlas/repository/MetadataRepository.java
View file @
a46711c5
...
@@ -104,13 +104,15 @@ public interface MetadataRepository {
...
@@ -104,13 +104,15 @@ public interface MetadataRepository {
List
<
String
>
getEntityList
(
String
entityType
)
throws
RepositoryException
;
List
<
String
>
getEntityList
(
String
entityType
)
throws
RepositoryException
;
/**
/**
* Deletes
an entity definition (instance) corresponding to a given type
.
* Deletes
entities for the specified guids
.
*
*
* @param guid
globally unique identifier for the entity
* @param guid
s globally unique identifiers for the deletion candidate entities
* @return
true if deleted else false
* @return
guids of deleted entities
* @throws RepositoryException
* @throws RepositoryException
*/
*/
// boolean deleteEntity(String guid) throws RepositoryException;
List
<
String
>
deleteEntities
(
String
...
guids
)
throws
RepositoryException
;
// Trait management functions
// Trait management functions
/**
/**
...
...
repository/src/main/java/org/apache/atlas/repository/graph/GraphBackedMetadataRepository.java
View file @
a46711c5
...
@@ -24,18 +24,22 @@ import com.tinkerpop.blueprints.Direction;
...
@@ -24,18 +24,22 @@ import com.tinkerpop.blueprints.Direction;
import
com.tinkerpop.blueprints.Edge
;
import
com.tinkerpop.blueprints.Edge
;
import
com.tinkerpop.blueprints.GraphQuery
;
import
com.tinkerpop.blueprints.GraphQuery
;
import
com.tinkerpop.blueprints.Vertex
;
import
com.tinkerpop.blueprints.Vertex
;
import
org.apache.atlas.AtlasException
;
import
org.apache.atlas.AtlasException
;
import
org.apache.atlas.GraphTransaction
;
import
org.apache.atlas.GraphTransaction
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.MetadataRepository
;
import
org.apache.atlas.repository.MetadataRepository
;
import
org.apache.atlas.repository.RepositoryException
;
import
org.apache.atlas.repository.RepositoryException
;
import
org.apache.atlas.repository.graph.TypedInstanceToGraphMapper.Operation
;
import
org.apache.atlas.typesystem.ITypedReferenceableInstance
;
import
org.apache.atlas.typesystem.ITypedReferenceableInstance
;
import
org.apache.atlas.typesystem.ITypedStruct
;
import
org.apache.atlas.typesystem.ITypedStruct
;
import
org.apache.atlas.typesystem.exception.EntityExistsException
;
import
org.apache.atlas.typesystem.exception.EntityExistsException
;
import
org.apache.atlas.typesystem.exception.EntityNotFoundException
;
import
org.apache.atlas.typesystem.exception.EntityNotFoundException
;
import
org.apache.atlas.typesystem.persistence.Id
;
import
org.apache.atlas.typesystem.types.AttributeInfo
;
import
org.apache.atlas.typesystem.types.AttributeInfo
;
import
org.apache.atlas.typesystem.types.ClassType
;
import
org.apache.atlas.typesystem.types.ClassType
;
import
org.apache.atlas.typesystem.types.IDataType
;
import
org.apache.atlas.typesystem.types.IDataType
;
import
org.apache.atlas.typesystem.types.TraitType
;
import
org.apache.atlas.typesystem.types.TypeSystem
;
import
org.apache.atlas.typesystem.types.TypeSystem
;
import
org.apache.atlas.typesystem.types.TypeUtils
;
import
org.apache.atlas.typesystem.types.TypeUtils
;
import
org.slf4j.Logger
;
import
org.slf4j.Logger
;
...
@@ -43,6 +47,7 @@ import org.slf4j.LoggerFactory;
...
@@ -43,6 +47,7 @@ import org.slf4j.LoggerFactory;
import
javax.inject.Inject
;
import
javax.inject.Inject
;
import
javax.inject.Singleton
;
import
javax.inject.Singleton
;
import
java.util.ArrayList
;
import
java.util.ArrayList
;
import
java.util.Collections
;
import
java.util.Collections
;
import
java.util.Iterator
;
import
java.util.Iterator
;
...
@@ -258,7 +263,8 @@ public class GraphBackedMetadataRepository implements MetadataRepository {
...
@@ -258,7 +263,8 @@ public class GraphBackedMetadataRepository implements MetadataRepository {
titanGraph
.
removeEdge
(
traitEdge
);
titanGraph
.
removeEdge
(
traitEdge
);
if
(
traitVertex
!=
null
)
{
// remove the trait instance from the repository
if
(
traitVertex
!=
null
)
{
// remove the trait instance from the repository
titanGraph
.
removeVertex
(
traitVertex
);
TypedInstanceToGraphMapper
instanceToGraphMapper
=
new
TypedInstanceToGraphMapper
(
graphToInstanceMapper
);
instanceToGraphMapper
.
deleteTraitVertex
(
traitNameToBeDeleted
,
traitVertex
);
// update the traits in entity once trait removal is successful
// update the traits in entity once trait removal is successful
traitNames
.
remove
(
traitNameToBeDeleted
);
traitNames
.
remove
(
traitNameToBeDeleted
);
...
@@ -270,6 +276,7 @@ public class GraphBackedMetadataRepository implements MetadataRepository {
...
@@ -270,6 +276,7 @@ public class GraphBackedMetadataRepository implements MetadataRepository {
}
}
}
}
private
void
updateTraits
(
Vertex
instanceVertex
,
List
<
String
>
traitNames
)
{
private
void
updateTraits
(
Vertex
instanceVertex
,
List
<
String
>
traitNames
)
{
// remove the key
// remove the key
instanceVertex
.
removeProperty
(
Constants
.
TRAIT_NAMES_PROPERTY_KEY
);
instanceVertex
.
removeProperty
(
Constants
.
TRAIT_NAMES_PROPERTY_KEY
);
...
@@ -304,4 +311,34 @@ public class GraphBackedMetadataRepository implements MetadataRepository {
...
@@ -304,4 +311,34 @@ public class GraphBackedMetadataRepository implements MetadataRepository {
throw
new
RepositoryException
(
e
);
throw
new
RepositoryException
(
e
);
}
}
}
}
@Override
@GraphTransaction
public
List
<
String
>
deleteEntities
(
String
...
guids
)
throws
RepositoryException
{
if
(
guids
==
null
||
guids
.
length
==
0
)
{
throw
new
IllegalArgumentException
(
"guids must be non-null and non-empty"
);
}
TypedInstanceToGraphMapper
instanceToGraphMapper
=
new
TypedInstanceToGraphMapper
(
graphToInstanceMapper
);
for
(
String
guid
:
guids
)
{
if
(
guid
==
null
)
{
LOG
.
warn
(
"deleteEntities: Ignoring null guid"
);
continue
;
}
try
{
Vertex
instanceVertex
=
graphHelper
.
getVertexForGUID
(
guid
);
String
typeName
=
GraphHelper
.
getTypeName
(
instanceVertex
);
instanceToGraphMapper
.
deleteEntity
(
typeName
,
instanceVertex
);
}
catch
(
EntityNotFoundException
e
)
{
// Entity does not exist - treat as non-error, since the caller
// wanted to delete the entity and it's already gone.
LOG
.
info
(
"Deletion request ignored for non-existent entity with guid "
+
guid
);
continue
;
}
catch
(
AtlasException
e
)
{
throw
new
RepositoryException
(
e
);
}
}
return
instanceToGraphMapper
.
getDeletedEntities
();
}
}
}
repository/src/main/java/org/apache/atlas/repository/graph/GraphHelper.java
View file @
a46711c5
...
@@ -26,6 +26,7 @@ import com.tinkerpop.blueprints.Edge;
...
@@ -26,6 +26,7 @@ import com.tinkerpop.blueprints.Edge;
import
com.tinkerpop.blueprints.Graph
;
import
com.tinkerpop.blueprints.Graph
;
import
com.tinkerpop.blueprints.GraphQuery
;
import
com.tinkerpop.blueprints.GraphQuery
;
import
com.tinkerpop.blueprints.Vertex
;
import
com.tinkerpop.blueprints.Vertex
;
import
org.apache.atlas.AtlasException
;
import
org.apache.atlas.AtlasException
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.typesystem.IReferenceableInstance
;
import
org.apache.atlas.typesystem.IReferenceableInstance
;
...
@@ -39,6 +40,7 @@ import org.apache.atlas.typesystem.types.DataTypes;
...
@@ -39,6 +40,7 @@ import org.apache.atlas.typesystem.types.DataTypes;
import
org.apache.atlas.typesystem.types.HierarchicalType
;
import
org.apache.atlas.typesystem.types.HierarchicalType
;
import
org.apache.atlas.typesystem.types.IDataType
;
import
org.apache.atlas.typesystem.types.IDataType
;
import
org.apache.atlas.typesystem.types.TypeSystem
;
import
org.apache.atlas.typesystem.types.TypeSystem
;
import
org.apache.atlas.typesystem.types.TypeUtils.Pair
;
import
org.slf4j.Logger
;
import
org.slf4j.Logger
;
import
org.slf4j.LoggerFactory
;
import
org.slf4j.LoggerFactory
;
...
@@ -175,11 +177,44 @@ public final class GraphHelper {
...
@@ -175,11 +177,44 @@ public final class GraphHelper {
LOG
.
info
(
"Removed edge {}"
,
edge
);
LOG
.
info
(
"Removed edge {}"
,
edge
);
if
(
cascade
)
{
if
(
cascade
)
{
Vertex
referredVertex
=
edge
.
getVertex
(
Direction
.
IN
);
Vertex
referredVertex
=
edge
.
getVertex
(
Direction
.
IN
);
titanGraph
.
removeVertex
(
referredVertex
);
removeVertex
(
referredVertex
);
LOG
.
info
(
"Removed vertex {}"
,
referredVertex
);
}
}
return
edge
;
return
edge
;
}
}
/**
* Remove the specified edge from the graph.
*
* @param edge
*/
public
void
removeEdge
(
Edge
edge
)
{
LOG
.
debug
(
"Removing edge {}"
,
edge
);
titanGraph
.
removeEdge
(
edge
);
LOG
.
info
(
"Removed edge {}"
,
edge
);
}
/**
* Return the edge and target vertex for the specified edge ID.
*
* @param edgeId
* @return edge and target vertex
*/
public
Pair
<
Edge
,
Vertex
>
getEdgeAndTargetVertex
(
String
edgeId
)
{
final
Edge
edge
=
titanGraph
.
getEdge
(
edgeId
);
Vertex
referredVertex
=
edge
.
getVertex
(
Direction
.
IN
);
return
Pair
.
of
(
edge
,
referredVertex
);
}
/**
* Remove the specified vertex from the graph.
*
* @param vertex
*/
public
void
removeVertex
(
Vertex
vertex
)
{
LOG
.
debug
(
"Removing vertex {}"
,
vertex
);
titanGraph
.
removeVertex
(
vertex
);
LOG
.
info
(
"Removed vertex {}"
,
vertex
);
}
public
Vertex
getVertexForGUID
(
String
guid
)
throws
EntityNotFoundException
{
public
Vertex
getVertexForGUID
(
String
guid
)
throws
EntityNotFoundException
{
return
getVertexForProperty
(
Constants
.
GUID_PROPERTY_KEY
,
guid
);
return
getVertexForProperty
(
Constants
.
GUID_PROPERTY_KEY
,
guid
);
...
@@ -269,7 +304,6 @@ public final class GraphHelper {
...
@@ -269,7 +304,6 @@ public final class GraphHelper {
return
result
;
return
result
;
}
}
public
static
void
dumpToLog
(
final
Graph
graph
)
{
public
static
void
dumpToLog
(
final
Graph
graph
)
{
LOG
.
debug
(
"*******************Graph Dump****************************"
);
LOG
.
debug
(
"*******************Graph Dump****************************"
);
LOG
.
debug
(
"Vertices of {}"
,
graph
);
LOG
.
debug
(
"Vertices of {}"
,
graph
);
...
...
repository/src/main/java/org/apache/atlas/repository/graph/TypedInstanceToGraphMapper.java
View file @
a46711c5
...
@@ -21,6 +21,7 @@ import com.thinkaurelius.titan.core.SchemaViolationException;
...
@@ -21,6 +21,7 @@ import com.thinkaurelius.titan.core.SchemaViolationException;
import
com.tinkerpop.blueprints.Direction
;
import
com.tinkerpop.blueprints.Direction
;
import
com.tinkerpop.blueprints.Edge
;
import
com.tinkerpop.blueprints.Edge
;
import
com.tinkerpop.blueprints.Vertex
;
import
com.tinkerpop.blueprints.Vertex
;
import
org.apache.atlas.AtlasException
;
import
org.apache.atlas.AtlasException
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.RepositoryException
;
import
org.apache.atlas.repository.RepositoryException
;
...
@@ -61,6 +62,7 @@ public final class TypedInstanceToGraphMapper {
...
@@ -61,6 +62,7 @@ public final class TypedInstanceToGraphMapper {
private
static
final
Logger
LOG
=
LoggerFactory
.
getLogger
(
TypedInstanceToGraphMapper
.
class
);
private
static
final
Logger
LOG
=
LoggerFactory
.
getLogger
(
TypedInstanceToGraphMapper
.
class
);
private
final
Map
<
Id
,
Vertex
>
idToVertexMap
=
new
HashMap
<>();
private
final
Map
<
Id
,
Vertex
>
idToVertexMap
=
new
HashMap
<>();
private
final
TypeSystem
typeSystem
=
TypeSystem
.
getInstance
();
private
final
TypeSystem
typeSystem
=
TypeSystem
.
getInstance
();
private
final
List
<
String
>
deletedEntities
=
new
ArrayList
<>();
private
final
GraphToTypedInstanceMapper
graphToTypedInstanceMapper
;
private
final
GraphToTypedInstanceMapper
graphToTypedInstanceMapper
;
...
@@ -108,7 +110,7 @@ public final class TypedInstanceToGraphMapper {
...
@@ -108,7 +110,7 @@ public final class TypedInstanceToGraphMapper {
addFullTextProperty
(
instancesPair
.
right
);
addFullTextProperty
(
instancesPair
.
right
);
break
;
break
;
case
DELETE
:
default
:
throw
new
UnsupportedOperationException
(
"Not handled - "
+
operation
);
throw
new
UnsupportedOperationException
(
"Not handled - "
+
operation
);
}
}
}
}
...
@@ -169,8 +171,8 @@ public final class TypedInstanceToGraphMapper {
...
@@ -169,8 +171,8 @@ public final class TypedInstanceToGraphMapper {
return
getId
(
typedInstance
).
_getId
();
return
getId
(
typedInstance
).
_getId
();
}
}
private
void
mapInstanceToVertex
(
ITypedInstance
typedInstance
,
Vertex
instanceVertex
,
void
mapInstanceToVertex
(
ITypedInstance
typedInstance
,
Vertex
instanceVertex
,
Map
<
String
,
AttributeInfo
>
fields
,
boolean
mapOnlyUniqueAttributes
,
Operation
operation
)
Map
<
String
,
AttributeInfo
>
fields
,
boolean
mapOnlyUniqueAttributes
,
Operation
operation
)
throws
AtlasException
{
throws
AtlasException
{
LOG
.
debug
(
"Mapping instance {} of {} to vertex {}"
,
typedInstance
,
typedInstance
.
getTypeName
(),
LOG
.
debug
(
"Mapping instance {} of {} to vertex {}"
,
typedInstance
,
typedInstance
.
getTypeName
(),
instanceVertex
);
instanceVertex
);
...
@@ -180,20 +182,26 @@ public final class TypedInstanceToGraphMapper {
...
@@ -180,20 +182,26 @@ public final class TypedInstanceToGraphMapper {
}
}
mapAttributesToVertex
(
typedInstance
,
instanceVertex
,
attributeInfo
,
operation
);
mapAttributesToVertex
(
typedInstance
,
instanceVertex
,
attributeInfo
,
operation
);
}
}
if
(
operation
==
Operation
.
DELETE
)
{
// Remove vertex for deletion candidate.
graphHelper
.
removeVertex
(
instanceVertex
);
}
}
}
void
mapAttributesToVertex
(
ITypedInstance
typedInstance
,
Vertex
instanceVertex
,
void
mapAttributesToVertex
(
ITypedInstance
typedInstance
,
Vertex
instanceVertex
,
AttributeInfo
attributeInfo
,
Operation
operation
)
throws
AtlasException
{
AttributeInfo
attributeInfo
,
Operation
operation
)
throws
AtlasException
{
Object
attrValue
=
typedInstance
.
get
(
attributeInfo
.
name
);
Object
attrValue
=
typedInstance
.
get
(
attributeInfo
.
name
);
LOG
.
debug
(
"mapping attribute {} = {}"
,
attributeInfo
.
name
,
attrValue
);
LOG
.
debug
(
"mapping attribute {} = {}"
,
attributeInfo
.
name
,
attrValue
);
final
String
propertyName
=
GraphHelper
.
getQualifiedFieldName
(
typedInstance
,
attributeInfo
);
String
edgeLabel
=
GraphHelper
.
getEdgeLabel
(
typedInstance
,
attributeInfo
);
if
(
attrValue
!=
null
||
operation
==
Operation
.
UPDATE_FULL
)
{
if
(
attrValue
!=
null
||
operation
==
Operation
.
UPDATE_FULL
||
operation
==
Operation
.
DELETE
)
{
switch
(
attributeInfo
.
dataType
().
getTypeCategory
())
{
switch
(
attributeInfo
.
dataType
().
getTypeCategory
())
{
case
PRIMITIVE:
case
PRIMITIVE:
case
ENUM:
case
ENUM:
mapPrimitiveOrEnumToVertex
(
typedInstance
,
instanceVertex
,
attributeInfo
);
if
(
operation
!=
Operation
.
DELETE
)
{
mapPrimitiveOrEnumToVertex
(
typedInstance
,
instanceVertex
,
attributeInfo
);
}
break
;
break
;
case
ARRAY:
case
ARRAY:
...
@@ -206,6 +214,8 @@ public final class TypedInstanceToGraphMapper {
...
@@ -206,6 +214,8 @@ public final class TypedInstanceToGraphMapper {
case
STRUCT:
case
STRUCT:
case
CLASS:
case
CLASS:
final
String
propertyName
=
GraphHelper
.
getQualifiedFieldName
(
typedInstance
,
attributeInfo
);
String
edgeLabel
=
GraphHelper
.
getEdgeLabel
(
typedInstance
,
attributeInfo
);
Iterator
<
Edge
>
outGoingEdgesIterator
=
Iterator
<
Edge
>
outGoingEdgesIterator
=
GraphHelper
.
getOutGoingEdgesByLabel
(
instanceVertex
,
edgeLabel
).
iterator
();
GraphHelper
.
getOutGoingEdgesByLabel
(
instanceVertex
,
edgeLabel
).
iterator
();
String
currentEntry
=
String
currentEntry
=
...
@@ -345,7 +355,7 @@ public final class TypedInstanceToGraphMapper {
...
@@ -345,7 +355,7 @@ public final class TypedInstanceToGraphMapper {
attributeInfo
.
name
);
attributeInfo
.
name
);
List
newElements
=
(
List
)
typedInstance
.
get
(
attributeInfo
.
name
);
List
newElements
=
(
List
)
typedInstance
.
get
(
attributeInfo
.
name
);
boolean
empty
=
(
newElements
==
null
||
newElements
.
isEmpty
());
boolean
empty
=
(
newElements
==
null
||
newElements
.
isEmpty
());
if
(!
empty
||
operation
==
Operation
.
UPDATE_FULL
)
{
if
(!
empty
||
operation
==
Operation
.
UPDATE_FULL
||
operation
==
Operation
.
DELETE
)
{
String
propertyName
=
GraphHelper
.
getQualifiedFieldName
(
typedInstance
,
attributeInfo
);
String
propertyName
=
GraphHelper
.
getQualifiedFieldName
(
typedInstance
,
attributeInfo
);
List
<
String
>
currentEntries
=
instanceVertex
.
getProperty
(
propertyName
);
List
<
String
>
currentEntries
=
instanceVertex
.
getProperty
(
propertyName
);
...
@@ -371,6 +381,14 @@ public final class TypedInstanceToGraphMapper {
...
@@ -371,6 +381,14 @@ public final class TypedInstanceToGraphMapper {
}
}
}
}
}
}
else
if
(
operation
==
Operation
.
UPDATE_FULL
||
operation
==
Operation
.
DELETE
)
{
// Clear all existing entries
if
(
currentEntries
!=
null
)
{
for
(
String
edgeId
:
currentEntries
)
{
removeUnusedReference
(
edgeId
,
attributeInfo
,
elementType
);
}
}
}
// for dereference on way out
// for dereference on way out
GraphHelper
.
setProperty
(
instanceVertex
,
propertyName
,
newEntries
);
GraphHelper
.
setProperty
(
instanceVertex
,
propertyName
,
newEntries
);
...
@@ -525,10 +543,10 @@ public final class TypedInstanceToGraphMapper {
...
@@ -525,10 +543,10 @@ public final class TypedInstanceToGraphMapper {
}
}
private
Id
getId
(
ITypedReferenceableInstance
typedReference
)
throws
EntityNotFoundException
{
private
Id
getId
(
ITypedReferenceableInstance
typedReference
)
throws
EntityNotFoundException
{
Id
id
=
null
;
if
(
typedReference
==
null
)
{
if
(
typedReference
!=
null
)
{
throw
new
IllegalArgumentException
(
"typedReference must be non-null"
);
id
=
typedReference
instanceof
Id
?
(
Id
)
typedReference
:
typedReference
.
getId
();
}
}
Id
id
=
typedReference
instanceof
Id
?
(
Id
)
typedReference
:
typedReference
.
getId
();
if
(
id
.
isUnassigned
())
{
if
(
id
.
isUnassigned
())
{
Vertex
classVertex
=
idToVertexMap
.
get
(
id
);
Vertex
classVertex
=
idToVertexMap
.
get
(
id
);
...
@@ -634,7 +652,7 @@ public final class TypedInstanceToGraphMapper {
...
@@ -634,7 +652,7 @@ public final class TypedInstanceToGraphMapper {
GraphHelper
.
setProperty
(
instanceVertex
,
vertexPropertyName
,
propertyValue
);
GraphHelper
.
setProperty
(
instanceVertex
,
vertexPropertyName
,
propertyValue
);
}
}
private
Edge
removeUnusedReference
(
String
edgeId
,
AttributeInfo
attributeInfo
,
IDataType
<?>
elementType
)
{
private
Edge
removeUnusedReference
(
String
edgeId
,
AttributeInfo
attributeInfo
,
IDataType
<?>
elementType
)
throws
AtlasException
{
//Remove edges for property values which do not exist any more
//Remove edges for property values which do not exist any more
Edge
removedRelation
=
null
;
Edge
removedRelation
=
null
;
switch
(
elementType
.
getTypeCategory
())
{
switch
(
elementType
.
getTypeCategory
())
{
...
@@ -643,9 +661,79 @@ public final class TypedInstanceToGraphMapper {
...
@@ -643,9 +661,79 @@ public final class TypedInstanceToGraphMapper {
//Remove the vertex from state so that further processing no longer uses this
//Remove the vertex from state so that further processing no longer uses this
break
;
break
;
case
CLASS:
case
CLASS:
removedRelation
=
graphHelper
.
removeRelation
(
edgeId
,
attributeInfo
.
isComposite
);
// TODO: disconnect inverse reference if attributeInfo.reverseAttributeName is non-null.
if
(
attributeInfo
.
isComposite
)
{
// Delete contained entity.
TypeUtils
.
Pair
<
Edge
,
Vertex
>
edgeAndVertex
=
graphHelper
.
getEdgeAndTargetVertex
(
edgeId
);
deleteEntity
(
elementType
.
getName
(),
edgeAndVertex
.
right
);
graphHelper
.
removeEdge
(
edgeAndVertex
.
left
);
removedRelation
=
edgeAndVertex
.
left
;
}
else
{
removedRelation
=
graphHelper
.
removeRelation
(
edgeId
,
false
);
}
break
;
break
;
}
}
return
removedRelation
;
return
removedRelation
;
}
}
void
deleteEntity
(
String
typeName
,
Vertex
instanceVertex
)
throws
AtlasException
{
// Remove traits owned by this entity.
deleteAllTraits
(
instanceVertex
);
// Create an empty instance to use for clearing all attributes.
Id
id
=
GraphHelper
.
getIdFromVertex
(
typeName
,
instanceVertex
);
ClassType
classType
=
typeSystem
.
getDataType
(
ClassType
.
class
,
typeName
);
ITypedReferenceableInstance
typedInstance
=
classType
.
createInstance
(
id
);
// Remove any underlying structs and composite entities owned by this entity.
mapInstanceToVertex
(
typedInstance
,
instanceVertex
,
classType
.
fieldMapping
().
fields
,
false
,
Operation
.
DELETE
);
deletedEntities
.
add
(
id
.
_getId
());
}
/**
* Delete all traits from the specified vertex.
*
* @param instanceVertex
* @throws AtlasException
*/
private
void
deleteAllTraits
(
Vertex
instanceVertex
)
throws
AtlasException
{
List
<
String
>
traitNames
=
GraphHelper
.
getTraitNames
(
instanceVertex
);
final
String
entityTypeName
=
GraphHelper
.
getTypeName
(
instanceVertex
);
for
(
String
traitNameToBeDeleted
:
traitNames
)
{
String
relationshipLabel
=
GraphHelper
.
getTraitLabel
(
entityTypeName
,
traitNameToBeDeleted
);
Iterator
<
Edge
>
results
=
instanceVertex
.
getEdges
(
Direction
.
OUT
,
relationshipLabel
).
iterator
();
if
(
results
.
hasNext
())
{
// there should only be one edge for this label
final
Edge
traitEdge
=
results
.
next
();
final
Vertex
traitVertex
=
traitEdge
.
getVertex
(
Direction
.
IN
);
// remove the edge to the trait instance from the repository
graphHelper
.
removeEdge
(
traitEdge
);
if
(
traitVertex
!=
null
)
{
// remove the trait instance from the repository
deleteTraitVertex
(
traitNameToBeDeleted
,
traitVertex
);
}
}
}
}
void
deleteTraitVertex
(
String
traitName
,
final
Vertex
traitVertex
)
throws
AtlasException
{
TraitType
traitType
=
typeSystem
.
getDataType
(
TraitType
.
class
,
traitName
);
ITypedStruct
traitStruct
=
traitType
.
createInstance
();
// Remove trait vertex along with any struct and class attributes owned by this trait.
mapInstanceToVertex
(
traitStruct
,
traitVertex
,
traitType
.
fieldMapping
().
fields
,
false
,
Operation
.
DELETE
);
}
/**
* Get the IDs of entities that have been deleted.
*
* @return
*/
List
<
String
>
getDeletedEntities
()
{
return
Collections
.
unmodifiableList
(
deletedEntities
);
}
}
}
repository/src/test/java/org/apache/atlas/repository/graph/GraphBackedMetadataRepositoryDeleteEntitiesTest.java
0 → 100644
View file @
a46711c5
/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package
org
.
apache
.
atlas
.
repository
.
graph
;
import
java.util.ArrayList
;
import
java.util.List
;
import
javax.inject.Inject
;
import
org.apache.atlas.RepositoryMetadataModule
;
import
org.apache.atlas.TestUtils
;
import
org.apache.atlas.discovery.graph.GraphBackedDiscoveryService
;
import
org.apache.atlas.repository.Constants
;
import
org.apache.atlas.repository.RepositoryException
;
import
org.apache.atlas.typesystem.ITypedReferenceableInstance
;
import
org.apache.atlas.typesystem.Referenceable
;
import
org.apache.atlas.typesystem.exception.EntityNotFoundException
;
import
org.apache.atlas.typesystem.types.ClassType
;
import
org.apache.atlas.typesystem.types.Multiplicity
;
import
org.apache.atlas.typesystem.types.TypeSystem
;
import
org.testng.Assert
;
import
org.testng.annotations.AfterClass
;
import
org.testng.annotations.BeforeClass
;
import
org.testng.annotations.Guice
;
import
org.testng.annotations.Test
;
import
com.thinkaurelius.titan.core.TitanGraph
;
import
com.thinkaurelius.titan.core.util.TitanCleanup
;
import
com.tinkerpop.blueprints.Vertex
;
/**
* Test for GraphBackedMetadataRepository.deleteEntities
*
* Guice loads the dependencies and injects the necessary objects
*
*/
@Guice
(
modules
=
RepositoryMetadataModule
.
class
)
public
class
GraphBackedMetadataRepositoryDeleteEntitiesTest
{
@Inject
private
GraphProvider
<
TitanGraph
>
graphProvider
;
@Inject
private
GraphBackedMetadataRepository
repositoryService
;
@Inject
private
GraphBackedDiscoveryService
discoveryService
;
private
TypeSystem
typeSystem
;
@BeforeClass
public
void
setUp
()
throws
Exception
{
typeSystem
=
TypeSystem
.
getInstance
();
typeSystem
.
reset
();
new
GraphBackedSearchIndexer
(
graphProvider
);
TestUtils
.
defineDeptEmployeeTypes
(
typeSystem
);
TestUtils
.
createHiveTypes
(
typeSystem
);
}
@AfterClass
public
void
tearDown
()
throws
Exception
{
TypeSystem
.
getInstance
().
reset
();
try
{
graphProvider
.
get
().
shutdown
();
}
catch
(
Exception
e
)
{
e
.
printStackTrace
();
}
try
{
TitanCleanup
.
clear
(
graphProvider
.
get
());
}
catch
(
Exception
e
)
{
e
.
printStackTrace
();
}
}
@Test
public
void
testDeleteEntities
()
throws
Exception
{
String
hrDeptGuid
=
createHrDeptGraph
();
ITypedReferenceableInstance
hrDept
=
repositoryService
.
getEntityDefinition
(
hrDeptGuid
);
Object
refValue
=
hrDept
.
get
(
"employees"
);
Assert
.
assertTrue
(
refValue
instanceof
List
);
List
<
Object
>
employees
=
(
List
<
Object
>)
refValue
;
Assert
.
assertEquals
(
employees
.
size
(),
4
);
List
<
String
>
employeeGuids
=
new
ArrayList
<
String
>(
4
);
for
(
Object
listValue
:
employees
)
{
Assert
.
assertTrue
(
listValue
instanceof
ITypedReferenceableInstance
);
ITypedReferenceableInstance
employee
=
(
ITypedReferenceableInstance
)
listValue
;
employeeGuids
.
add
(
employee
.
getId
().
_getId
());
}
// There should be 4 vertices for Address structs (one for each Person.address attribute value).
int
vertexCount
=
countVertices
(
Constants
.
ENTITY_TYPE_PROPERTY_KEY
,
"Address"
);
Assert
.
assertEquals
(
vertexCount
,
4
);
vertexCount
=
countVertices
(
Constants
.
ENTITY_TYPE_PROPERTY_KEY
,
"SecurityClearance"
);
Assert
.
assertEquals
(
vertexCount
,
1
);
List
<
String
>
deletedEntities
=
repositoryService
.
deleteEntities
(
hrDeptGuid
);
Assert
.
assertTrue
(
deletedEntities
.
contains
(
hrDeptGuid
));
// Verify Department entity and its contained Person entities were deleted.
verifyEntityDoesNotExist
(
hrDeptGuid
);
for
(
String
employeeGuid
:
employeeGuids
)
{
verifyEntityDoesNotExist
(
employeeGuid
);
}
// Verify all Person.address struct vertices were removed.
vertexCount
=
countVertices
(
Constants
.
ENTITY_TYPE_PROPERTY_KEY
,
"Address"
);
Assert
.
assertEquals
(
vertexCount
,
0
);
// Verify all SecurityClearance trait vertices were removed.
vertexCount
=
countVertices
(
Constants
.
ENTITY_TYPE_PROPERTY_KEY
,
"SecurityClearance"
);
Assert
.
assertEquals
(
vertexCount
,
0
);
}
@Test
(
dependsOnMethods
=
"testDeleteEntities"
)
public
void
testDeleteContainedEntity
()
throws
Exception
{
String
hrDeptGuid
=
createHrDeptGraph
();
ITypedReferenceableInstance
hrDept
=
repositoryService
.
getEntityDefinition
(
hrDeptGuid
);
Object
refValue
=
hrDept
.
get
(
"employees"
);
Assert
.
assertTrue
(
refValue
instanceof
List
);
List
<
Object
>
employees
=
(
List
<
Object
>)
refValue
;
Assert
.
assertEquals
(
employees
.
size
(),
4
);
Object
listValue
=
employees
.
get
(
2
);
Assert
.
assertTrue
(
listValue
instanceof
ITypedReferenceableInstance
);
ITypedReferenceableInstance
employee
=
(
ITypedReferenceableInstance
)
listValue
;
String
employeeGuid
=
employee
.
getId
().
_getId
();
List
<
String
>
deletedEntities
=
repositoryService
.
deleteEntities
(
employeeGuid
);
Assert
.
assertTrue
(
deletedEntities
.
contains
(
employeeGuid
));
verifyEntityDoesNotExist
(
employeeGuid
);
}
private
String
createHrDeptGraph
()
throws
Exception
{
Referenceable
deptEg1
=
TestUtils
.
createDeptEg1
(
typeSystem
);
ClassType
deptType
=
typeSystem
.
getDataType
(
ClassType
.
class
,
"Department"
);
ITypedReferenceableInstance
hrDept2
=
deptType
.
convert
(
deptEg1
,
Multiplicity
.
REQUIRED
);
List
<
String
>
guids
=
repositoryService
.
createEntities
(
hrDept2
);
Assert
.
assertNotNull
(
guids
);
Assert
.
assertEquals
(
guids
.
size
(),
5
);
List
<
String
>
entityList
=
repositoryService
.
getEntityList
(
"Department"
);
Assert
.
assertNotNull
(
entityList
);
Assert
.
assertEquals
(
entityList
.
size
(),
1
);
String
hrDeptGuid
=
entityList
.
get
(
0
);
return
hrDeptGuid
;
}
private
int
countVertices
(
String
propertyName
,
Object
value
)
{
Iterable
<
Vertex
>
vertices
=
graphProvider
.
get
().
getVertices
(
propertyName
,
value
);
int
vertexCount
=
0
;
for
(
Vertex
vertex
:
vertices
)
{
vertexCount
++;
}
return
vertexCount
;
}
private
void
verifyEntityDoesNotExist
(
String
hrDeptGuid
)
throws
RepositoryException
{
try
{
repositoryService
.
getEntityDefinition
(
hrDeptGuid
);
Assert
.
fail
(
"EntityNotFoundException was expected but none thrown"
);
}
catch
(
EntityNotFoundException
e
)
{
// good
}
}
}
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment