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dataplatform
atlas
Commits
be7c4cb6
Commit
be7c4cb6
authored
Jan 19, 2015
by
Venkatesh Seetharam
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ISSUE-38 Map type to graph with type prefixes to enable search. Contributed by Venkatesh Seetharam
parent
1d1531ef
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3 changed files
with
89 additions
and
72 deletions
+89
-72
GraphBackedMetadataRepository.java
...adata/repository/graph/GraphBackedMetadataRepository.java
+0
-0
GraphUtils.java
...g/apache/hadoop/metadata/repository/graph/GraphUtils.java
+24
-33
EntityJerseyResourceIT.java
...hadoop/metadata/web/resources/EntityJerseyResourceIT.java
+65
-39
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repository/src/main/java/org/apache/hadoop/metadata/repository/graph/GraphBackedMetadataRepository.java
View file @
be7c4cb6
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repository/src/main/java/org/apache/hadoop/metadata/repository/graph/GraphUtils.java
View file @
be7c4cb6
...
@@ -23,10 +23,14 @@ import com.tinkerpop.blueprints.Edge;
...
@@ -23,10 +23,14 @@ import com.tinkerpop.blueprints.Edge;
import
com.tinkerpop.blueprints.Graph
;
import
com.tinkerpop.blueprints.Graph
;
import
com.tinkerpop.blueprints.GraphQuery
;
import
com.tinkerpop.blueprints.GraphQuery
;
import
com.tinkerpop.blueprints.Vertex
;
import
com.tinkerpop.blueprints.Vertex
;
import
org.apache.hadoop.metadata.ITypedInstance
;
import
org.apache.hadoop.metadata.ITypedReferenceableInstance
;
import
org.apache.hadoop.metadata.storage.Id
;
import
org.slf4j.Logger
;
import
org.slf4j.Logger
;
import
org.slf4j.LoggerFactory
;
import
org.slf4j.LoggerFactory
;
import
java.util.Iterator
;
import
java.util.Iterator
;
import
java.util.UUID
;
/**
/**
* Utility class for graph operations.
* Utility class for graph operations.
...
@@ -38,40 +42,26 @@ public final class GraphUtils {
...
@@ -38,40 +42,26 @@ public final class GraphUtils {
private
GraphUtils
()
{
private
GraphUtils
()
{
}
}
public
static
Edge
addEdge
(
Vertex
fromVertex
,
Vertex
toVertex
,
public
static
Vertex
createVertex
(
Graph
graph
,
String
vertexPropertyKey
,
String
edgeLabel
)
{
ITypedReferenceableInstance
typedInstance
)
{
return
addEdge
(
fromVertex
,
toVertex
,
vertexPropertyKey
,
edgeLabel
,
null
);
return
createVertex
(
graph
,
typedInstance
,
typedInstance
.
getId
()
);
}
}
public
static
Edge
addEdge
(
Vertex
fromVertex
,
Vertex
toVertex
,
public
static
Vertex
createVertex
(
Graph
graph
,
String
vertexPropertyKey
,
String
edgeLabel
,
String
timestamp
)
{
ITypedInstance
typedInstance
,
Edge
edge
=
findEdge
(
fromVertex
,
toVertex
,
vertexPropertyKey
,
edgeLabel
);
Id
typedInstanceId
)
{
final
Vertex
instanceVertex
=
graph
.
addVertex
(
null
);
// type
instanceVertex
.
setProperty
(
Constants
.
ENTITY_TYPE_PROPERTY_KEY
,
typedInstance
.
getTypeName
());
Edge
edgeToVertex
=
edge
!=
null
?
edge
:
fromVertex
.
addEdge
(
edgeLabel
,
toVertex
);
// id
if
(
timestamp
!=
null
)
{
final
String
guid
=
UUID
.
randomUUID
().
toString
();
edgeToVertex
.
setProperty
(
Constants
.
TIMESTAMP_PROPERTY_KEY
,
timestamp
);
instanceVertex
.
setProperty
(
Constants
.
GUID_PROPERTY_KEY
,
guid
);
}
return
edgeToVertex
;
}
public
static
Edge
findEdge
(
Vertex
fromVertex
,
Vertex
toVertex
,
// version
String
vertexPropertyKey
,
String
edgeLabel
)
{
instanceVertex
.
setProperty
(
Constants
.
VERSION_PROPERTY_KEY
,
typedInstanceId
.
version
);
return
findEdge
(
fromVertex
,
toVertex
.
getProperty
(
vertexPropertyKey
),
vertexPropertyKey
,
edgeLabel
);
}
public
static
Edge
findEdge
(
Vertex
fromVertex
,
Object
toVertexName
,
String
vertexPropertyKey
,
String
edgeLabel
)
{
Edge
edgeToFind
=
null
;
for
(
Edge
edge
:
fromVertex
.
getEdges
(
Direction
.
OUT
,
edgeLabel
))
{
if
(
edge
.
getVertex
(
Direction
.
IN
).
getProperty
(
vertexPropertyKey
).
equals
(
toVertexName
))
{
edgeToFind
=
edge
;
break
;
}
}
return
edgeToFind
;
return
instanceVertex
;
}
}
public
static
Vertex
findVertex
(
Graph
blueprintsGraph
,
public
static
Vertex
findVertex
(
Graph
blueprintsGraph
,
...
@@ -97,23 +87,23 @@ public final class GraphUtils {
...
@@ -97,23 +87,23 @@ public final class GraphUtils {
public
static
String
edgeString
(
final
Edge
edge
)
{
public
static
String
edgeString
(
final
Edge
edge
)
{
return
"e["
+
edge
.
getLabel
()
+
"], ["
return
"e["
+
edge
.
getLabel
()
+
"], ["
+
edge
.
getVertex
(
Direction
.
OUT
)
.
getProperty
(
"name"
)
+
edge
.
getVertex
(
Direction
.
OUT
)
+
" -> "
+
edge
.
getLabel
()
+
" -> "
+
" -> "
+
edge
.
getLabel
()
+
" -> "
+
edge
.
getVertex
(
Direction
.
IN
)
.
getProperty
(
"name"
)
+
edge
.
getVertex
(
Direction
.
IN
)
+
"]"
;
+
"]"
;
}
}
public
static
void
dumpToLog
(
final
Graph
graph
)
{
public
static
void
dumpToLog
(
final
Graph
graph
)
{
LOG
.
debug
(
"*******************Graph Dump****************************"
);
LOG
.
debug
(
"Vertices of {}"
,
graph
);
LOG
.
debug
(
"Vertices of {}"
,
graph
);
for
(
Vertex
vertex
:
graph
.
getVertices
())
{
for
(
Vertex
vertex
:
graph
.
getVertices
())
{
LOG
.
debug
(
vertexString
(
vertex
));
LOG
.
debug
(
vertexString
(
vertex
));
System
.
out
.
println
(
vertexString
(
vertex
));
}
}
LOG
.
debug
(
"Edges of {}"
,
graph
);
LOG
.
debug
(
"Edges of {}"
,
graph
);
for
(
Edge
edge
:
graph
.
getEdges
())
{
for
(
Edge
edge
:
graph
.
getEdges
())
{
LOG
.
debug
(
edgeString
(
edge
));
LOG
.
debug
(
edgeString
(
edge
));
System
.
out
.
println
(
edgeString
(
edge
));
}
}
LOG
.
debug
(
"*******************Graph Dump****************************"
);
}
}
}
}
\ No newline at end of file
webapp/src/test/java/org/apache/hadoop/metadata/web/resources/EntityJerseyResourceIT.java
View file @
be7c4cb6
...
@@ -34,15 +34,16 @@ import org.apache.hadoop.metadata.types.Multiplicity;
...
@@ -34,15 +34,16 @@ import org.apache.hadoop.metadata.types.Multiplicity;
import
org.apache.hadoop.metadata.types.StructTypeDefinition
;
import
org.apache.hadoop.metadata.types.StructTypeDefinition
;
import
org.apache.hadoop.metadata.types.TraitType
;
import
org.apache.hadoop.metadata.types.TraitType
;
import
org.codehaus.jettison.json.JSONObject
;
import
org.codehaus.jettison.json.JSONObject
;
import
org.slf4j.Logger
;
import
org.slf4j.LoggerFactory
;
import
org.testng.Assert
;
import
org.testng.Assert
;
import
org.testng.annotations.BeforeClass
;
import
org.testng.annotations.BeforeClass
;
import
org.testng.annotations.Test
;
import
org.testng.annotations.Test
;
import
scala.actors.threadpool.Arrays
;
import
javax.ws.rs.HttpMethod
;
import
javax.ws.rs.HttpMethod
;
import
javax.ws.rs.core.MediaType
;
import
javax.ws.rs.core.MediaType
;
import
javax.ws.rs.core.Response
;
import
javax.ws.rs.core.Response
;
import
java.util.ArrayList
;
import
java.util.List
;
import
java.util.UUID
;
import
java.util.UUID
;
/**
/**
...
@@ -50,28 +51,29 @@ import java.util.UUID;
...
@@ -50,28 +51,29 @@ import java.util.UUID;
*/
*/
public
class
EntityJerseyResourceIT
extends
BaseResourceIT
{
public
class
EntityJerseyResourceIT
extends
BaseResourceIT
{
private
static
final
Logger
LOG
=
LoggerFactory
.
getLogger
(
EntityJerseyResourceIT
.
class
);
private
static
final
String
DATABASE_TYPE
=
"hive_database"
;
private
static
final
String
DATABASE_TYPE
=
"hive_database"
;
private
static
final
String
DATABASE_NAME
=
"foo"
;
private
static
final
String
DATABASE_NAME
=
"foo"
;
private
static
final
String
TABLE_TYPE
=
"hive_table"
;
private
static
final
String
TABLE_TYPE
=
"hive_table"
;
private
static
final
String
TABLE_NAME
=
"bar"
;
private
static
final
String
TABLE_NAME
=
"bar"
;
private
static
final
String
TRAIT_TYPE
=
"hive_fetl"
;
private
String
tableInstanceAsJSON
;
private
ITypedReferenceableInstance
tableInstance
;
private
String
guid
;
private
String
guid
;
@BeforeClass
@BeforeClass
public
void
setUp
()
throws
Exception
{
public
void
setUp
()
throws
Exception
{
super
.
setUp
();
super
.
setUp
();
List
<
HierarchicalTypeDefinition
>
typeDefinitions
=
createHiveTypes
();
createHiveTypes
();
submitTypes
(
typeDefinitions
);
submitTypes
();
}
}
@Test
@Test
public
void
testSubmitEntity
()
throws
Exception
{
public
void
testSubmitEntity
()
throws
Exception
{
ITypedReferenceableInstance
tableInstance
=
createHiveTableInstance
();
tableInstance
=
createHiveTableInstance
();
String
tableInstanceAsJSON
=
Serialization
$
.
MODULE
$
.
toJson
(
tableInstance
);
tableInstanceAsJSON
=
Serialization
$
.
MODULE
$
.
toJson
(
tableInstance
);
LOG
.
debug
(
"tableInstance = "
+
tableInstanceAsJSON
);
WebResource
resource
=
service
WebResource
resource
=
service
.
path
(
"api/metadata/entities/submit"
)
.
path
(
"api/metadata/entities/submit"
)
...
@@ -119,12 +121,24 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
...
@@ -119,12 +121,24 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
final
String
definition
=
response
.
getString
(
"definition"
);
final
String
definition
=
response
.
getString
(
"definition"
);
Assert
.
assertNotNull
(
definition
);
Assert
.
assertNotNull
(
definition
);
LOG
.
debug
(
"tableInstanceAfterGet = "
+
definition
);
// todo - this fails with type error, strange
// ITypedReferenceableInstance tableInstanceAfterGet = Serialization$.MODULE$.fromJson(definition);
// Assert.assertTrue(areEqual(tableInstance, tableInstanceAfterGet));
}
System
.
out
.
println
(
"definition = "
+
definition
);
/*
System
.
out
.
println
(
"tableInstanceAsJSON = "
+
tableInstanceAsJSON
);
private boolean areEqual(ITypedReferenceableInstance actual,
// Assert.assertEquals(definition, tableInstanceAsJSON);
ITypedReferenceableInstance expected) throws Exception {
for (AttributeInfo attributeInfo : actual.fieldMapping().fields.values()) {
Assert.assertEquals(actual.get(attributeInfo.name), expected.get(attributeInfo.name));
}
}
return true;
}
*/
@Test
@Test
public
void
testGetInvalidEntityDefinition
()
{
public
void
testGetInvalidEntityDefinition
()
{
WebResource
resource
=
service
WebResource
resource
=
service
...
@@ -165,15 +179,19 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
...
@@ -165,15 +179,19 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
System
.
out
.
println
(
"response = "
+
response
);
System
.
out
.
println
(
"response = "
+
response
);
}
}
private
List
<
HierarchicalTypeDefinition
>
createHiveTypes
()
throws
Exception
{
private
void
createHiveTypes
()
throws
Exception
{
ArrayList
<
HierarchicalTypeDefinition
>
typeDefinitions
=
new
ArrayList
<>();
HierarchicalTypeDefinition
<
ClassType
>
databaseTypeDefinition
=
HierarchicalTypeDefinition
<
ClassType
>
databaseTypeDefinition
=
createClassTypeDef
(
DATABASE_TYPE
,
createClassTypeDef
(
DATABASE_TYPE
,
ImmutableList
.<
String
>
of
(),
ImmutableList
.<
String
>
of
(),
createRequiredAttrDef
(
"name"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"name"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"description"
,
DataTypes
.
STRING_TYPE
));
createRequiredAttrDef
(
"description"
,
DataTypes
.
STRING_TYPE
));
typeDefinitions
.
add
(
databaseTypeDefinition
);
StructTypeDefinition
structTypeDefinition
=
new
StructTypeDefinition
(
"serdeType"
,
new
AttributeDefinition
[]
{
createRequiredAttrDef
(
"name"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"serde"
,
DataTypes
.
STRING_TYPE
)
});
HierarchicalTypeDefinition
<
ClassType
>
tableTypeDefinition
=
HierarchicalTypeDefinition
<
ClassType
>
tableTypeDefinition
=
createClassTypeDef
(
TABLE_TYPE
,
createClassTypeDef
(
TABLE_TYPE
,
...
@@ -181,32 +199,31 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
...
@@ -181,32 +199,31 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
createRequiredAttrDef
(
"name"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"name"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"description"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"description"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"type"
,
DataTypes
.
STRING_TYPE
),
createRequiredAttrDef
(
"type"
,
DataTypes
.
STRING_TYPE
),
new
AttributeDefinition
(
DATABASE_TYPE
,
new
AttributeDefinition
(
"serde1"
,
DATABASE_TYPE
,
Multiplicity
.
REQUIRED
,
true
,
DATABASE_TYPE
));
"serdeType"
,
Multiplicity
.
REQUIRED
,
false
,
null
),
typeDefinitions
.
add
(
tableTypeDefinition
);
new
AttributeDefinition
(
"serde2"
,
"serdeType"
,
Multiplicity
.
REQUIRED
,
false
,
null
),
HierarchicalTypeDefinition
<
TraitType
>
fetlTypeDefinition
=
new
AttributeDefinition
(
"database"
,
createTraitTypeDef
(
TRAIT_TYPE
,
DATABASE_TYPE
,
Multiplicity
.
REQUIRED
,
true
,
null
));
HierarchicalTypeDefinition
<
TraitType
>
classificationTypeDefinition
=
createTraitTypeDef
(
"classification"
,
ImmutableList
.<
String
>
of
(),
ImmutableList
.<
String
>
of
(),
createRequiredAttrDef
(
"level"
,
DataTypes
.
INT_TYPE
));
createRequiredAttrDef
(
"tag"
,
DataTypes
.
STRING_TYPE
));
typeDefinitions
.
add
(
fetlTypeDefinition
);
typeSystem
.
defineTypes
(
typeSystem
.
defineTypes
(
ImmutableList
.
<
StructTypeDefinition
>
of
(
),
ImmutableList
.
of
(
structTypeDefinition
),
ImmutableList
.
of
(
fetl
TypeDefinition
),
ImmutableList
.
of
(
classification
TypeDefinition
),
ImmutableList
.
of
(
databaseTypeDefinition
,
tableTypeDefinition
));
ImmutableList
.
of
(
databaseTypeDefinition
,
tableTypeDefinition
));
return
typeDefinitions
;
}
}
private
void
submitTypes
(
List
<
HierarchicalTypeDefinition
>
typeDefinitions
)
throws
Exception
{
private
void
submitTypes
()
throws
Exception
{
for
(
HierarchicalTypeDefinition
typeDefinition
:
typeDefinitions
)
{
String
typesAsJSON
=
TypesSerialization
.
toJson
(
typeSystem
,
String
typesAsJSON
=
TypesSerialization
.
toJson
(
Arrays
.
asList
(
new
String
[]{
DATABASE_TYPE
,
TABLE_TYPE
,
"serdeType"
,
"classification"
}));
typeSystem
,
typeDefinition
.
typeName
);
WebResource
resource
=
service
WebResource
resource
=
service
.
path
(
"api/metadata/types/submit"
)
.
path
(
"api/metadata/types/submit"
)
.
path
(
typeDefinition
.
typeName
);
.
path
(
TABLE_TYPE
);
ClientResponse
clientResponse
=
resource
ClientResponse
clientResponse
=
resource
.
accept
(
MediaType
.
APPLICATION_JSON
)
.
accept
(
MediaType
.
APPLICATION_JSON
)
...
@@ -218,25 +235,34 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
...
@@ -218,25 +235,34 @@ public class EntityJerseyResourceIT extends BaseResourceIT {
Assert
.
assertNotNull
(
responseAsString
);
Assert
.
assertNotNull
(
responseAsString
);
JSONObject
response
=
new
JSONObject
(
responseAsString
);
JSONObject
response
=
new
JSONObject
(
responseAsString
);
Assert
.
assertEquals
(
response
.
get
(
"typeName"
),
typeDefinition
.
typeName
);
Assert
.
assertEquals
(
response
.
get
(
"typeName"
),
TABLE_TYPE
);
Assert
.
assertNotNull
(
response
.
get
(
"types"
));
Assert
.
assertNotNull
(
response
.
get
(
"types"
));
Assert
.
assertNotNull
(
response
.
get
(
"requestId"
));
Assert
.
assertNotNull
(
response
.
get
(
"requestId"
));
}
}
}
protected
ITypedReferenceableInstance
createHiveTableInstance
()
throws
Exception
{
protected
ITypedReferenceableInstance
createHiveTableInstance
()
throws
Exception
{
Referenceable
databaseInstance
=
new
Referenceable
(
DATABASE_TYPE
);
Referenceable
databaseInstance
=
new
Referenceable
(
DATABASE_TYPE
);
databaseInstance
.
set
(
"name"
,
DATABASE_NAME
);
databaseInstance
.
set
(
"name"
,
DATABASE_NAME
);
databaseInstance
.
set
(
"description"
,
"foo database"
);
databaseInstance
.
set
(
"description"
,
"foo database"
);
Referenceable
tableInstance
=
new
Referenceable
(
TABLE_TYPE
,
TRAIT_TYPE
);
Referenceable
tableInstance
=
new
Referenceable
(
TABLE_TYPE
,
"classification"
);
tableInstance
.
set
(
"name"
,
TABLE_NAME
);
tableInstance
.
set
(
"name"
,
TABLE_NAME
);
tableInstance
.
set
(
"description"
,
"bar table"
);
tableInstance
.
set
(
"description"
,
"bar table"
);
tableInstance
.
set
(
"type"
,
"managed"
);
tableInstance
.
set
(
"type"
,
"managed"
);
tableInstance
.
set
(
DATABASE_TYPE
,
databaseInstance
);
tableInstance
.
set
(
"database"
,
databaseInstance
);
Struct
traitInstance
=
(
Struct
)
tableInstance
.
getTrait
(
"classification"
);
traitInstance
.
set
(
"tag"
,
"foundation_etl"
);
Struct
serde1Instance
=
new
Struct
(
"serdeType"
);
serde1Instance
.
set
(
"name"
,
"serde1"
);
serde1Instance
.
set
(
"serde"
,
"serde1"
);
tableInstance
.
set
(
"serde1"
,
serde1Instance
);
Struct
traitInstance
=
(
Struct
)
tableInstance
.
getTrait
(
TRAIT_TYPE
);
Struct
serde2Instance
=
new
Struct
(
"serdeType"
);
traitInstance
.
set
(
"level"
,
1
);
serde2Instance
.
set
(
"name"
,
"serde2"
);
serde2Instance
.
set
(
"serde"
,
"serde2"
);
tableInstance
.
set
(
"serde2"
,
serde2Instance
);
ClassType
tableType
=
typeSystem
.
getDataType
(
ClassType
.
class
,
TABLE_TYPE
);
ClassType
tableType
=
typeSystem
.
getDataType
(
ClassType
.
class
,
TABLE_TYPE
);
return
tableType
.
convert
(
tableInstance
,
Multiplicity
.
REQUIRED
);
return
tableType
.
convert
(
tableInstance
,
Multiplicity
.
REQUIRED
);
...
...
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